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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCCAAGGTGGCGTCGGCGGCGGAGTTCAGCCTGTCCCAGATCTGGGTCATCTCCGGCTCCTTCGGCAACGACCTCAACACCATCGAGGCCGGATGGCAGgtgcgtacgttacgttacgtgcttgctgcaatcaaaaccgccctgcttattgctgccgtacgtacgtgcatgtgtactcgccctcacttaaacaacctcc...

Basic information

species Zea mays
transcript GRMZM2G162928_T02
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G162928_T03 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os01g07570.1 (Oryza sativa), 5'ss of exon 4
GGCCAAGGTGGCGTCGGCGGCGGAGTTCAGCCTGTCCCAGATCTGGGTCATCTCCGGCTCCTTCGGCAACGACCTCAACACCATCGAGGCCGGATGGCAGgtg-cgtacgttacgtta--cgtgcttgctgcaatcaaaaccgccctgc-ttattgctgccgtacgtacgtgcatgtgtactcgccctcacttaaacaacctcc
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GGCGAGGGTGGCGACGGCGGCGGAGTTCAGCCTCTCTCAGATCTGGGTCATCTCCGGCTCCTTCGGCAATGACCTCAACACCATCGAAGCCGGATGGCAGgtaatctagtctaatctaatctaatctctcatgcattaatctgccctatatcaatataatcatatgtacactcatgcatgtt-gcatgcatgcaagaactc---