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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGCCAACTCAGTTCTACATGGCACTGgtaaggcacaataccaagtttctcttatctttattttgattcctgcagcgtaatgactgaacttagcttttgcaatgcag

Basic information

species Zea mays
transcript GRMZM2G153434_T03
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32837225|gb|CD976903.1|CD976903
EST:     CTGCCAACTCAGTTCTACATGGCACTG                         CTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
genomic: CTGCCAACTCAGTTCTACATGGCACTGgtaaggcaca ... tgcaatgcagCTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
EST: gi|71307331|gb|DR789850.1|DR789850
EST:     CTGCCAACTCAGTTCTACATGGCACTG                         CTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
genomic: CTGCCAACTCAGTTCTACATGGCACTGgtaaggcaca ... tgcaatgcagCTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
EST: gi|32836692|gb|CD976370.1|CD976370
EST:     CTGCCAACTCAGTTCTACATGGCACTG                         CTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
genomic: CTGCCAACTCAGTTCTACATGGCACTGgtaaggcaca ... tgcaatgcagCTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
EST: gi|120479959|gb|EH210676.1|EH210676
EST:     CTGCCAACTCAGTTCTACATGGCACTG                         CTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC
genomic: CTGCCAACTCAGTTCTACATGGCACTGgtaaggcaca ... tgcaatgcagCTATATACCATCACAACTCTGATTCTTACTGGACAGACGATCTACTATAGC