1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGGGGAACCTGACTAACCTTGTCAGTTTGGATCTGTATATGAACAACTTCTCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattcattttgtttaccagttactagcaccctcatatattgttttactagctgtttttaatgcttagacagttttcagtttttttttaaatttgtt...
species | Zea mays |
transcript | GRMZM2G150024_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCTGGCAATATCCCTGACAGCCTAGGGAATCTATTGAAGCTGCGTTTCCT ACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAAEST: gi|148934569|gb|EC878617.2|EC878617
genomic: TCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattca ... gcaatgatagACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAA
EST: TCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCT ACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAAEST: gi|22542236|gb|BU092674.1|BU092674
genomic: TCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattca ... gcaatgatagACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAA
EST: TCTGGCAATATCCCTGACAGCCTAGGGAATCTATTGAAGCTGCGTTTCCT ACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAAEST: gi|26559220|gb|CA831455.1|CA831455
genomic: TCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattca ... gcaatgatagACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAA
EST: TCTGGCAATATCCCTGACAGCCTAGGGAATCTATTGAAGCTGCGTTTCCT ACGTCTTAACAACAACAGCTTGGCTGGTCCCATTCCTGTAGCCTTGACCAAEST: gi|87156676|gb|DY401465.1|DY401465
genomic: TCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattca ... gcaatgatagACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAA
EST: TCTGGCAATATCCCTGACAGCCTAGGGAATCTATTGAAGCTGCGTTTCCT ACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAA
genomic: TCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattca ... gcaatgatagACGTCTTAACAACAACAGCTTGGTTGGTCCCATTCCTGTAGCCTTGACCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGGAACCTGACTAACCTTGTCAGTTTGGATCTGTATATGAACAACTTCTCTGGCAATATCCCTGACCGCCTAGGGAATCTATTGAAGCTGCGTTTCCTgtaagattcattttgtttaccagttactagcaccctcatatattgttttactagctgtttttaatgcttagacagttttcagtttttttttaaatttgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcaccctc