1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAGgtaaaaagaaacattttctcatactattgctaaatttgtcattttccgtgattatcagaattaaacttcatgtttatatttcttagcatgtaagcacatg...
species | Zea mays |
transcript | GRMZM2G147726_T04 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAGGATCTTCCAGEST: gi|71775316|gb|DR973194.1|DR973194
genomic: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAAT-A--A-G------CAGgtaaaaagaa ... g
EST: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAGGATCTTCCAGEST: gi|211217104|gb|FL383487.1|FL383487
genomic: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAAT-A--A-G------CAGgtaaaaagaa ... g
EST: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAG GTGCACTCGATGATGCTGCCATTACAGAGTCATTAGAACTACACAAAATTAEST: gi|33092385|gb|CF052379.1|CF052379
genomic: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAGgtaaaaagaa ... gatcttccagGTGCACTCGATGATGCTGCCATTACAGAGTCATTAGAACTACACAAAATTA
EST: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAGGATCTTCCAG
genomic: GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAAT-A--A-G------CAGgtaaaaagaa ... g
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGATGAACTTAAAGGTGCAGTTGTCCTTGTGTATGCAAATAAGCAGgtaaaaagaaacattttctcatactattgctaaatttgtcattttccgtgattatcagaattaaacttcatgtttatatttcttagcatgtaagcacatg
AGGATG