1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCAAGGATGTTTGTGCAAAACCTCCTACCGAGCGCCTCTTCCTTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctccaactcgtttttctggcctcgtggatatttctttgtgcctgtaatctgggtatggtataatgcttaccatatcagctggatgttccaatgt...
species | Zea mays |
transcript | GRMZM2G138053_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTAEST: gi|50329775|gb|CO524901.1|CO524901
genomic: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
EST: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTAEST: gi|4885897|gb|AI677017.1|AI677017
genomic: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
EST: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTAEST: gi|88750361|gb|DY534502.1|DY534502
genomic: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
EST: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTAEST: gi|113795695|gb|DW912380.1|DW912380
genomic: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
EST: GGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTAEST: gi|116818193|gb|EC861175.1|EC861175
genomic: GGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
EST: TTGACCAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGGGGAGGTTGATTAGACTAEST: gi|116817866|gb|EC860776.1|EC860776
genomic: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
EST: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAG GGGTTGCTTGAAAACACGGAGAAAGACAGAGTGGGGAGGTTGATTAGACTA
genomic: TTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctcc ... atcatcccagGGGTTGCTTGAAAACACGGAGAAAGACAGAGTGAGGAGGTTGATTAGACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAAGGATGTTTGTGCAAAACCTCCTACCGAGCGCCTCTTCCTTGACAAATACGGGAGGATCTGCTTGTGCCTTGATGAGATTGTTTGGAAGgtacatctccaactcgtttttctggcctcgtggatatttctttgtgcctgtaatctgggtatggtataatgcttaccatatcagctggatgttccaatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG