1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTCCTATGTATACAACTCTACGGCGCACGACAGTTGTGTTTACAATGACAATGGAGTATTTCCTGGCAAAGCAGAAGCACACCCCACCTATAATAGGCAGgtaaatatatggatatttgttctttttctgtatctcaagaatgaatagtttgcggtagttagctagcgtaagtttcatttcattcaatgcatttctgccc...
species | Zea mays |
transcript | GRMZM2G133226_T06 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATGGAGTATTTCCTGGCAAAGCAGAAGCACACCCCACCTATAATAGGCAG TGTGGCTTTGATTGTATTCGGAGCATTCGTTGCTGGAGCTCGAGACTTGTCEST: gi|71440136|gb|DR821186.1|DR821186
genomic: ATGGAGTATTTCCTGGCAAAGCAGAAGCACACCCCACCTATAATAGGCAGgtaaatatat ... gttttatcagTGTGGCTTTGATTGTATTCGGAGCATTCGTTGCTGGAGCTCGAGACTTGTC
EST: ATGGAGTATTTCCTGGCAAAGCAGAAGCACACCCCACCTATAATAGGCAG TGTGGCTTTGATTGTATTCGGAGCATTCGTTGCTGGAGCTCGAGACTTGTC
genomic: ATGGAGTATTTCCTGGCAAAGCAGAAGCACACCCCACCTATAATAGGCAGgtaaatatat ... gttttatcagTGTGGCTTTGATTGTATTCGGAGCATTCGTTGCTGGAGCTCGAGACTTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCCTATGTATACAACTCTACGGCGCACGACAGTTGTGTTTACAATGACAATGGAGTATTTCCTGGCAAAGCAGAAGCACACCCCACCTATAATAGGCAGgtaaatatatggatatttgttctttttctgtatctcaagaatgaatagtttgcggtagttagctagcgtaagtttcatttcattcaatgcatttctgccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC