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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTTgtgagaaacactttcacctaaactcgtgcactgtactttcctttggccaacccaactgaacaagttgcttgatggtttacag

Basic information

species Zea mays
transcript GRMZM2G125889_T09
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71758749|gb|DR956686.1|DR956686
EST:     CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTT            
genomic: CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTTgtgagaaaca .
EST: gi|6431878|gb|AW172082.1|AW172082
EST:     CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTT            
genomic: CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTTgtgagaaaca .
EST: gi|60353518|gb|DN220491.1|DN220491
EST:     CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTTTGGGTT            
genomic: CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTTgtgagaaaca .
EST: gi|110194811|gb|EC876709.1|EC876709
EST:     CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCT-GG--            
genomic: CTGACGGTGTGATGGCGACAATTGCAGTCATCCTCTGCCTGTTCTGGGTTGCCTGTTCTGGGTTgtgagaaaca .