1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTATCAAGCAAGCGTGTGAAGATGCTCACAAGAATGGTGCAATCATTGCTGTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactacccttctttcaaaggatttcctgtcagattcgcagcttgggaccatctgggcccagctgcacacgtttccagatctacatgagtacatgcc...
species | Zea mays |
transcript | GRMZM2G121128_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAATGCCAATGAAGCEST: gi|78091987|gb|DV520361.1|DV520361
genomic: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGCEST: gi|86469599|gb|DY235969.1|DY235969
genomic: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: AATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGCEST: gi|149086699|gb|EE176239.2|EE176239
genomic: AATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: GCATCAAGCGTTGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGCEST: gi|211417518|gb|FL458755.1|FL458755
genomic: GCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGCEST: gi|33467397|gb|CF244446.1|CF244446
genomic: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGCEST: gi|148935933|gb|EC879983.2|EC879983
genomic: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: ATCAGATGTATCTTGCATCAGGCGTGGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGCEST: gi|71319274|gb|DR796400.1|DR796400
genomic: ATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
EST: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCG GGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
genomic: GTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactac ... caattttcagGGACATTGTAAGAAACTATGCAGATATACTGTTCGCCAACGCCAATGAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATCAAGCAAGCGTGTGAAGATGCTCACAAGAATGGTGCAATCATTGCTGTTACTGCATCAGATGTATCTTGCATCAAGCGTTGCTACAATGACTTTCGgtgagactacccttctttcaaaggatttcctgtcagattcgcagcttgggaccatctgggcccagctgcacacgtttccagatctacatgagtacatgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG