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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTATATCAGAGATGTCTCCTGCTCTCCAACTGGCAACTGAACACTGTTTTATTCTTCCAGATCCACCAAGTGACCTCAAAGATCCGGCTTCCACTTTCAGgtaatgtaacttatcgtatgacacttgtttggtatagacctaaattttatactgattaaaaattggacttgtag

Basic information

species Zea mays
transcript GRMZM2G119261_T03
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G119261_T03 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os04g01970.1 (Oryza sativa), 5'ss of exon 4
CTATATCAGAGATGTCTCCTGCTCTCCAACTGGCAACTGAACACTGTTTTATTCTTCCAGATCCACCAAGTGACCTCAAAGATCCGGCTTCCACTTTCAGgtaatgtaacttatcgtatgacacttgtttggtatagacctaa-att-----ttatactgattaa-aaattgga-cttgtag
||||||| || |||||||||||||| |||||||||||    || |||||||||||||  |||||||||| |||||||||||||||  |   || | | |||||||||   | ||   ||||  |||| || | |||||  |   |||     |   |||||||   |||||||| |||||||
CTATATCTGATATGTCTCCTGCTCTTCAACTGGCAACAATGCATTGTTTTATTCTTCAGGATCCACCAAATGACCTCAAAGATCCACCGGTCAGTATAAGgtaatgttgatcataccatgagtcttgcttagaatagagttgctattgcaaatctcactgattgggaaattggaacttgtag