1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTTTTTCCAGATTGGTCCACTGGCTATGCCAAGAAATTCCTAGAAATATTACTAACTAACCATGATTCCATGAGATGGCAACTATCACTGGCCCCTTAAGgttatttttctagagcaagtatatattttgtatacgactgcatcaatttcatgtgtttgtggctttgtgcctcttcttttcagtcttaagttacttttac...
species | Zea mays |
transcript | GRMZM2G116840_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACTAACTAACCATGATTCCATGAGATGGCAACTATCACTGGCCCCTTAAG ATATACTGTATGACTCGTGGTCCCCAGCGATGACTGTCAGTTCTATCTGTAEST: gi|88749741|gb|DY533882.1|DY533882
genomic: ACTAACTAACCATGATTCCATGAGATGGCAACTATCACTGGCCCCTTAAGgttatttttc ... ttacctacagATATACTGTATGACTCGTGGTCCCCAGCGATGACTGTCAGTTCTATCTGTA
EST: ACTAACTAACCATGATTCCATGAGATGGCAACTATCACTGGCCCCTTAAG ATATACTGTATGACTCGTGGTCCCCAGCGATGACTGTCAGTTCTATCTGTA
genomic: ACTAACTAACCATGATTCCATGAGATGGCAACTATCACTGGCCCCTTAAGgttatttttc ... ttacctacagATATACTGTATGACTCGTGGTCCCCAGCGATGACTGTCAGTTCTATCTGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTTTCCAGATTGGTCCACTGGCTATGCCAAGAAATTCCTAGAAATATTACTAACTAACCATGATTCCATGAGATGGCAACTATCACTGGCCCCTTAAGgttatttttctagagcaagtatatattttgtatacgactgcatcaatttcatgtgtttgtggctttgtgcctcttcttttcagtcttaagttacttttac
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