1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAATTACTTCTGCTTCGGGTATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattagccttttgtaattttattccacctgactagtaactactattgcacaaaaaggtttccattttaggctttacatgggatgaaatcccatcat...
species | Zea mays |
transcript | GRMZM2G105604_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAG TGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATAEST: gi|71761266|gb|DR959203.1|DR959203
genomic: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattag ... ttcgctgcagTGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATA
EST: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAG TGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATAEST: gi|50328370|gb|CO523496.1|CO523496
genomic: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattag ... ttcgctgcagTGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATA
EST: AGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAG TGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATAEST: gi|166425226|gb|EG075140.1|EG075140
genomic: AGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattag ... ttcgctgcagTGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATA
EST: ATT-CAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAG TGTCAGATTTTTAACNGGCCACTCCEST: gi|71762338|gb|DR960275.1|DR960275
genomic: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattag ... ttcgctgcagTGTCAGATTTTTAACTGGCCACTCC
EST: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAG TGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATAEST: gi|86467413|gb|DY233783.1|DY233783
genomic: ATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattag ... ttcgctgcagTGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATA
EST: GCATTCCGTTAACCCATAGAGGTGTTGCTACCAG TGTCAGATTTTTATCTGGCCACTCCAGAAATGGTGGGACAGATCCACTATA
genomic: GCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattag ... ttcgctgcagTGTCAGATTTTTAACTGGCCACTCCAGAAATGGTGGGACAGATCCACTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATTACTTCTGCTTCGGGTATTGCAGCAGAGCTAGGCATTCCGTTAACCCATAGAGGTGTTGCTACCAGgtttgattagccttttgtaattttattccacctgactagtaactactattgcacaaaaaggtttccattttaggctttacatgggatgaaatcccatcat
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