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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGCCTGGATTTTGAATGCCACACTTGTTGTACCTGAGTTAGACCACCACTCGTTCTGGAAAGACGACAGgtgaattgagaactagaattctagaaattacaggacgtttgctgaatgttactgttccaaaatggcttgacttcaaatttcgtatgcag

Basic information

species Zea mays
transcript GRMZM2G101181_T02
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G101181_T02 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os04g46570.1 (Oryza sativa), 5'ss of exon 4
-------------------TTGCCTGGATTTTGAATGCCACACTTGTTGTACCTGAGTTAGACCACCACTCGTTCTGGAAAGACGACAGgtgaattgagaact-agaattctag------------aaattacaggacgtttgctgaatgttactgttccaaaatggcttgacttcaaatttcgtatgcag
                   | ||| | || |||||||||||||||||||||||||||||||| |||||||| |||||||| || || |||| | |||||| || | |||| ||             | |||| | ||| ||     | ||      |||  | ||   |  |  | ||  |    ||  | 
ATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGgtaagttgagaccttaaaattatacttcctccatttcatattataagactttctagcattgcccacattcacatatatgtcaa--tgaatctagacatatat