1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGTTCAGGCATCAATTGTATCGAATCCCACCTTTTGGGAAAGAATTGGTAGCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttccttgctctttccaatttatatttatttcctgccaccaccggtgaattttcatcagttagtttttactcgtaacaatgttcttcttttgcag
species | Zea mays |
transcript | GRMZM2G100246_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|8665864|gb|BE186680.1|BE186680
genomic: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: TACCGACATGCTGTTCTTTGCGTTCTGCTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|60357172|gb|DN224145.1|DN224145
genomic: TACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|211424247|gb|FK965923.1|FK965923
genomic: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|74238445|gb|DT646359.1|DT646359
genomic: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|60342982|gb|DN209955.1|DN209955
genomic: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: CGACACATTAGCTACCGACATGCTNGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|30087988|gb|CB886193.1|CB886193
genomic: CGACACATTAGCTACCGACATGCT-GTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGGEST: gi|9951952|gb|BE638535.1|BE638535
genomic: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
EST: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAG AACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
genomic: GCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttc ... tcttttgcagAACACATATCAACAATACTTGGCTGCTAGAGAACTGAAGAAGCAATCATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTCAGGCATCAATTGTATCGAATCCCACCTTTTGGGAAAGAATTGGTAGCGACACATTAGCTACCGACATGCTGTTCTTTGCGTTCTACTACCAACAGgtcaattttccttgctctttccaatttatatttatttcctgccaccaccggtgaattttcatcagttagtttttactcgtaacaatgttcttcttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT