1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTTTGCAAGTGCGAGATGCCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcattatagatgaagcatgctggcctaatatttttttatacagcatttacctccttttctctggtgcattctttaattcaattgattgctttattg...
species | Zea mays |
transcript | GRMZM2G097726_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GNTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|78180631|gb|DV550959.1|DV550959
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: TCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|19822612|gb|BQ048636.1|BQ048636
genomic: TCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|18648816|gb|BM497635.1|BM497635
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|8551650|gb|BE128821.1|BE128821
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATGCAATCCAGATG-CCTTATGATCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|60354816|gb|DN221789.1|DN221789
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|18649546|gb|BM498365.1|BM498365
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GNTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|18649399|gb|BM498218.1|BM498218
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGAEST: gi|18649290|gb|BM498109.1|BM498109
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
EST: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTG GTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
genomic: CCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcatta ... cctctttcagGTTTCACCCTGCTTGCATTGGGATGACAATCAAAGAAGCAAAGAAACTCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTGCAAGTGCGAGATGCCATACAATCCAGATGACCTTATGATCCAATGCGAGGAATGTTCTGACTGgtgagcattatagatgaagcatgctggcctaatatttttttatacagcatttacctccttttctctggtgcattctttaattcaattgattgctttattg
- - - - - - - - - - - - - - CAGATG