Skip to another splice site:
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 5'  3'   		5  
 5'  3'   		6  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctgtttgactggtttacccattttcctcatttgtgggtcaactgttcctaatggtgatgttgtcaactgtgaattcttagtgttgaagtttcattacataaaaataagttccctagctactggttctggtttattcaggttttattacttcattagggagctgattttttttttgaatcgaatag

Basic information

species Zea mays
transcript GRMZM2G094712_T02
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094712_T02 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os01g55540.2 (Oryza sativa), 5'ss of exon 4
GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctgtttgactggtttacccattttcctcatttgtgggtcaactgttcctaatggtga--tgttgtcaactgtgaattcttagtgttgaagtttcattacataaaaataagttccctagctactggttctggtttattcaggttttattacttcatt-agggagctgattttttttttgaatcgaatag
||||||||| ||||||||  | || ||||| || ||||| || |||||||||||||| ||||||||||| ||||| ||||||||||    ||    |  |  |  ||   ||  || | ||   |   ||| ||||| |   ||   |  |||    ||| || || |  |     | |  |  | |          | || ||| | ||||||   | ||| ||||||   || |||||  | ||| |   | |||||| |  | || | | ||| ||
GTCACGTGTTAAGGAGTATTTGCCGATCACTGGACTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcctgctctcaagaatatatatggtcat-atggtttcctcatctgttacctttgaccaattgtaacaaacagtaaaattatctcactaagataacttct--------tcagatcctttgctact---tttggcttattc---ttgtattaggtaattcacaaaactgattatactatttattggaacag

upper sequence: GRMZM2G094712_T02 (Zea mays), 5'ss of exon 4
lower sequence: Vv04s0008g03770.t01 (Vitis vinifera), 5'ss of exon 4
GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctgtttgactggtttacccattttcctcatttgtgggtcaactgttcctaatggtgatgttgtcaactgtgaattcttagtgttgaagtttcattacataaaaataagttccctagctactggttctggtttattcaggttttattacttcattagggagctgattttttttttgaatcgaatag
||| || ||||| || || || || ||    || ||||| |||||||||||  |||| |||||||| || |||||||||||||||||           |     | |    ||||    |||  | |   |     | |    |    | |    ||  |||    |  |||    |   ||  |||  ||||| | | ||                                                                           
GTCCCGGGTCAAAGAATATCTTCCTATTGTTGGGCTGGCAGAATTCAATAAATTGAGTGCTAAGCTCATGTTTGGCGCTGACAGgtac----------aagaactcaatattttttggaattcatagagtagtccattcaggagagtgtat----aaaagtgg---cacagttcctatcatttgttaactaaaagttaatt---------------------------------------------------------------------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32798377|gb|CD950613.1|CD950613
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|51592836|gb|CV071982.1|CV071982
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|15323595|gb|BI478852.1|BI478852
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGG
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGG
EST: gi|32798706|gb|CD950942.1|CD950942
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAACTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|47961783|gb|CN844492.1|CN844492
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211211706|gb|FL374152.1|FL374152
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31357714|gb|CD442071.1|CD442071
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|51592763|gb|CV071909.1|CV071909
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|6021419|gb|AW066347.1|AW066347
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCG
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCG
EST: gi|18053152|gb|BM318810.1|BM318810
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211014760|gb|FL416055.1|FL416055
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|33102539|gb|CF062499.1|CF062499
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|32808331|gb|CD960565.1|CD960565
EST:     CTGGCTGAACTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211443956|gb|FL410276.1|FL410276
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211099665|gb|FL378492.1|FL378492
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|51593002|gb|CV072148.1|CV072148
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCGTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|62550538|gb|DN830958.1|DN830958
EST:     TGGCTGAATTCAATAAGCTGAGCGCTAAGCTCTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGAGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTA
genomic: TGGCTGAATTCAATAAGCTGAGCGCTAAGCT-TATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAG-GAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTA
EST: gi|58029674|gb|CX725101.1|CX725101
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|20803254|gb|BQ294304.1|BQ294304
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|33942552|gb|CF349152.1|CF349152
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|108953678|gb|EC364837.1|EC364837
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|58029769|gb|CX725196.1|CX725196
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|44681683|gb|CK786731.1|CK786731
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|47962228|gb|CN844937.1|CN844937
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|67024299|gb|CO453048.1|CO453048
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211144698|gb|FL413095.1|FL413095
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|33101649|gb|CF061609.1|CF061609
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|47961407|gb|CN844116.1|CN844116
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|108954266|gb|EC365083.1|EC365083
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|94476203|gb|EB705161.1|EB705161
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|32803624|gb|CD955860.1|CD955860
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|15188202|gb|BI417179.1|BI417179
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGA
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGA
EST: gi|31353308|gb|CD437665.1|CD437665
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAT                         TTTTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|149014131|gb|EE043672.2|EE043672
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|108953108|gb|EC364589.1|EC364589
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|62550494|gb|DN830914.1|DN830914
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|6020876|gb|AW065804.1|AW065804
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGNTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211323634|gb|FL399609.1|FL399609
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|47961406|gb|CN844115.1|CN844115
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|109637234|gb|EC590779.1|EC590779
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31356983|gb|CD441340.1|CD441340
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|62550589|gb|DN831009.1|DN831009
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211041751|gb|FL371252.1|FL371252
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211199749|gb|FL411771.1|FL411771
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211493670|gb|FL398960.1|FL398960
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|26456907|gb|CA828490.1|CA828490
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|45213782|gb|CK850009.1|CK850009
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|20507973|gb|BQ279845.1|BQ279845
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|47961457|gb|CN844166.1|CN844166
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|38502508|gb|CF972368.1|CF972368
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211504654|gb|FL412020.1|FL412020
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211449902|gb|FL391246.1|FL391246
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|18383833|gb|BM417033.1|BM417033
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|44682191|gb|CK787239.1|CK787239
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTTA
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGT-A
EST: gi|15323594|gb|BI478851.1|BI478851
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTA
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTA
EST: gi|211535952|gb|FL381085.1|FL381085
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|148986993|gb|EE030811.2|EE030811
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31250263|gb|CD219287.1|CD219287
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211296653|gb|FL387902.1|FL387902
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|213184108|gb|FM191702.1|FM191702
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|149108013|gb|EE292368.2|EE292368
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31361794|gb|CD446151.1|CD446151
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGTTAG                         CCCTGCTATTCATGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGCAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|33101615|gb|CF061575.1|CF061575
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211313595|gb|FL415828.1|FL415828
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATTCGGGTA
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTAT-CGGGTA
EST: gi|9731418|gb|BE510170.1|BE510170
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|111433992|gb|EE298061.1|EE298061
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|109637672|gb|EC591217.1|EC591217
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|111145728|gb|EE258080.1|EE258080
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211289848|gb|FL370551.1|FL370551
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31351488|gb|CD435845.1|CD435845
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|16137336|gb|BI894201.1|BI894201
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211029227|gb|FL368599.1|FL368599
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|148940851|gb|EC885683.2|EC885683
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31363808|gb|CD448163.1|CD448163
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|148941397|gb|EC886314.2|EC886314
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|32798269|gb|CD950505.1|CD950505
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211493669|gb|FL398959.1|FL398959
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|33101567|gb|CF061527.1|CF061527
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|31358307|gb|CD442664.1|CD442664
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211039937|gb|FL415152.1|FL415152
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CC-TGCTATTCAGGAGAATAGGG
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGG
EST: gi|31250213|gb|CD219237.1|CD219237
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|9255298|gb|BE345766.1|BE345766
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211130248|gb|FL407379.1|FL407379
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|47961719|gb|CN844428.1|CN844428
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCCATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|29130123|gb|CB380827.1|CB380827
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|108823876|gb|EC277884.1|EC277884
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|9255430|gb|BE345898.1|BE345898
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211159439|gb|FL370490.1|FL370490
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|9461770|gb|BE453896.1|BE453896
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|62525922|gb|DN828570.1|DN828570
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|6626482|gb|AW258014.1|AW258014
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGGGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|32798421|gb|CD950657.1|CD950657
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|149065671|gb|EE286793.2|EE286793
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|9794571|gb|BE552879.1|BE552879
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|109637534|gb|EC591079.1|EC591079
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|33102411|gb|CF062371.1|CF062371
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211060007|gb|FL387699.1|FL387699
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|51592747|gb|CV071893.1|CV071893
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211363355|gb|FL393791.1|FL393791
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCNGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|60672637|gb|DN475335.1|DN475335
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|40485897|gb|CK394794.1|CK394794
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211266269|gb|FL388730.1|FL388730
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
EST: gi|211245085|gb|FL389172.1|FL389172
EST:     CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG                         CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC
genomic: CTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 47 (upstream exon), 48 (downstream exon)
Score: 217

GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 525

GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 407

GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 550

GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctg ... aatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
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---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAGgtattctctgtttgactggtttacccattttcctcatttgtgggtcaactgttcctaatggtgatgttgtcaactgtgaattcttagtgttgaagtttcattacataaaaataagttccctagctactggttctggtttattcaggttttattacttcattagggagctgattttttttttgaatcgaatag

- - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA