1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTCTTTTATACCAAGCCCTAGGTGGCAAAGTCCTTCAAATTATGCGCCGATGATTGTACCTCAGGGCCTTGTTCAAATGCAGAGCTGGAATTCATATACTgtaagttcatttggtacattaatgcagtgtaatttttacaattataaagcaatcacgttatcttttttcctagagattccctagaggaacagggagcgga...
species | Zea mays |
transcript | GRMZM2G087032_T04 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGATTGTACCTCAGGGCCTTGTTCAAATGCAGAGCTGGAATTCATATACT GGTCAGCTGCAGTCACCTGGGGCTCAACAAACTTATGGAAGTTCACAACAAEST: gi|71759560|gb|DR957497.1|DR957497
genomic: TGATTGTACCTCAGGGCCTTGTTCAAATGCAGAGCTGGAATTCATATACTgtaagttcat ... atcttctcagGGTCAGCTGCAGTCACCTGGGGCTCAACAAACTTATGGAAGTTCACAACAA
EST: TGATTGTACCTCAGGGCCTTGTTCAAATGCAGAGCTGGAATTCATATACT GGTCAGCTGCAGTCACCTGGGGCTCAACAAACTTATGGAAGTTCACAACAA
genomic: TGATTGTACCTCAGGGCCTTGTTCAAATGCAGAGCTGGAATTCATATACTgtaagttcat ... atcttctcagGGTCAGCTGCAGTCACCTGGGGCTCAACAAACTTATGGAAGTTCACAACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCTTTTATACCAAGCCCTAGGTGGCAAAGTCCTTCAAATTATGCGCCGATGATTGTACCTCAGGGCCTTGTTCAAATGCAGAGCTGGAATTCATATACTgtaagttcatttggtacattaatgcagtgtaatttttacaattataaagcaatcacgttatcttttttcctagagattccctagaggaacagggagcgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA