Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatatttttttctgtatattttaaattggaactcttcagattaaaattagcctttttttcttcattctaactatctaataaaatttgaatagtcttt...

Basic information

species Zea mays
transcript GRMZM2G086904_T01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G086904_T01 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os03g38960.2 (Oryza sativa), 5'ss of exon 3
CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatatt-tttttctg---tatattttaaattggaactc-ttcagattaaaattagcctttttttcttcattctaactatcta-ataaaatttgaatagtcttt
||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||  | ||||||     ||||  |  ||| || | |  |||| |  |    || ||| |   | |||||| |    || |     |  |    |||      
CATGAATGCTCCAGTTATGGTTGAGCTTGAGGGAGAAACTGATCCTCTTGAGgtaaattctatttttccaaactatacatgcaataggtatttgttcaaacaagcgataacctctacatattcattattttgatttttgccagttccatata------

upper sequence: GRMZM2G086904_T01 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA10G38350.2 (Glycine max), 5'ss of exon 4
CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaa-atatttttttctgtatattttaaattggaactcttcagattaaa-attagcctttttttcttcattctaactatctaata---aaatttgaatagtcttt
 |||||||| || |||||||||||| | ||||| ||||||||||| |||||||||| | |   |||| |     ||  |  |||  ||| ||    || ||  |||     | |    ||||| | | ||| | ||    ||| |||          
TATGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGgtaatagaaccttttgttctctttgcagtttgatactttttttctttaatgttattgcatctgagctcattgtgagtatttcattgccaaacttgtgcca-----

upper sequence: GRMZM2G086904_T01 (Zea mays), 5'ss of exon 4
lower sequence: AT2G04630.1 (Arabidopsis thaliana), 5'ss of exon 4
CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatatttttttctgtatattttaaattgga--actcttcagattaaaattagcctttttttcttcattctaactatctaataaaatttgaatagtcttt--
|||||||||||| || ||||||||| | |||||||| ||||| || ||||||||      || || ||   | || |   ||  |  | |  |||| | ||  ||    | | | |   ||||     | | || |  |   ||| | | |||   
CATGAATGCTCCTGTTATGGTTGAGTTGGAGGGTGAGACTGATCCACTTGAGgtgttgccttcttccttcttgttgtgtttttcatgatttgtcag-taaatgttgatatgtatatgaacatttgtgttgtttattgta---tgatttggcttaag

upper sequence: GRMZM2G086904_T01 (Zea mays), 5'ss of exon 4
lower sequence: AT5G51940.1 (Arabidopsis thaliana), 5'ss of exon 4
CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatatttttttctgtatattttaaattggaactcttcagattaaaattagcctttttttcttcattctaacta-tctaataaaatttgaatagtcttt
|||||||||||| |||||||||||||| |||||||| ||||| || ||||||||     |   |  ||   | || |   ||       || |  |   | | | |  || | |   ||||  | ||| | || ||  ||||| ||       
CATGAATGCTCCTGTCATGGTTGAGCTAGAGGGTGAGACTGATCCACTTGAGgtgtgcttacctaccttcttgttgttggtttttgaagtt-atgtctcagtaaac--ttatatgaacatttgagctaatttattatgatttggattcag---

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37388006|gb|CF631207.1|CF631207
EST:     CATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: CATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211479823|gb|FL079091.1|FL079091
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211497131|gb|FL079176.1|FL079176
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|89756827|gb|DY686702.1|DY686702
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211132169|gb|FL066406.1|FL066406
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211202195|gb|FL066453.1|FL066453
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGATCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211500014|gb|FL079188.1|FL079188
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|32838705|gb|CD978386.1|CD978386
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211497141|gb|FL079186.1|FL079186
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|213173412|gb|FM186750.1|FM186750
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60355492|gb|DN222465.1|DN222465
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|6431831|gb|AW172035.1|AW172035
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211491362|gb|FL079150.1|FL079150
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAAGATACCCTTCACGATTCAGAC
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAA-GATACCCTTCACGAT-CAGAC
EST: gi|60394107|gb|DN226977.1|DN226977
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211488472|gb|FL079130.1|FL079130
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211497133|gb|FL079178.1|FL079178
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|67033929|gb|CO462678.1|CO462678
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|67023915|gb|CO452664.1|CO452664
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|213191189|gb|FM195899.1|FM195899
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCCTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211356285|gb|FL079082.1|FL079082
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211199643|gb|FL066449.1|FL066449
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60354164|gb|DN221137.1|DN221137
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211482713|gb|FL079106.1|FL079106
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|148949027|gb|EC894449.2|EC894449
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211482719|gb|FL079112.1|FL079112
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211482707|gb|FL079100.1|FL079100
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60355890|gb|DN222863.1|DN222863
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|18176963|gb|BM378173.1|BM378173
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211485599|gb|FL079126.1|FL079126
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211494246|gb|FL079165.1|FL079165
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60352015|gb|DN218988.1|DN218988
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211204767|gb|FL066468.1|FL066468
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211485591|gb|FL079118.1|FL079118
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211482708|gb|FL079101.1|FL079101
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGCGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211500015|gb|FL079189.1|FL079189
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211199632|gb|FL066438.1|FL066438
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211482718|gb|FL079111.1|FL079111
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211491367|gb|FL079155.1|FL079155
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|30087311|gb|CB885519.1|CB885519
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|33468145|gb|CF245194.1|CF245194
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|33467779|gb|CF244828.1|CF244828
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211479822|gb|FL079090.1|FL079090
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211199642|gb|FL066448.1|FL066448
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211132178|gb|FL066415.1|FL066415
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211485597|gb|FL079124.1|FL079124
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAWGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|71317789|gb|DR795655.1|DR795655
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|13490631|gb|BG517395.1|BG517395
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|67030385|gb|CO459134.1|CO459134
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|37379391|gb|CF626441.1|CF626441
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|9824896|gb|BE574993.1|BE574993
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211133111|gb|FL066433.1|FL066433
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|18178384|gb|BM379594.1|BM379594
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60355684|gb|DN222657.1|DN222657
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211202205|gb|FL066463.1|FL066463
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211491361|gb|FL079149.1|FL079149
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211133107|gb|FL066429.1|FL066429
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211133106|gb|FL066428.1|FL066428
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211008098|gb|FL135922.1|FL135922
EST:     GAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGAACG
genomic: GAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAA-CTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGA-CG
EST: gi|60349499|gb|DN216472.1|DN216472
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211497142|gb|FL079187.1|FL079187
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211491366|gb|FL079154.1|FL079154
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211479829|gb|FL079097.1|FL079097
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|213192645|gb|FM191594.1|FM191594
EST:     GGTTGCGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: GGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211494250|gb|FL079169.1|FL079169
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|13389425|gb|BG462716.1|BG462716
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|16918257|gb|BM073664.1|BM073664
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCATGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211479820|gb|FL079088.1|FL079088
EST:     TGAATGCTCCAGTNATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCA
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCA
EST: gi|26457622|gb|CA829205.1|CA829205
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211204768|gb|FL066469.1|FL066469
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211494252|gb|FL079171.1|FL079171
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211479827|gb|FL079095.1|FL079095
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211485595|gb|FL079122.1|FL079122
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211485590|gb|FL079117.1|FL079117
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211202199|gb|FL066457.1|FL066457
EST:     TGAATGCYCCAGTCATGGTTGAGCTTGAGGGARAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|33092908|gb|CF052902.1|CF052902
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|32908545|gb|CF013358.1|CF013358
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|20301294|gb|BQ164237.1|BQ164237
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211131248|gb|FL066400.1|FL066400
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGT
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60337282|gb|DN204255.1|DN204255
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCTCGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211488483|gb|FL079141.1|FL079141
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCG
EST: gi|211491358|gb|FL079146.1|FL079146
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60343431|gb|DN210404.1|DN210404
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211491357|gb|FL079145.1|FL079145
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|33467778|gb|CF244827.1|CF244827
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|40485863|gb|CK394777.1|CK394777
EST:     TGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|30087312|gb|CB885520.1|CB885520
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211482709|gb|FL079102.1|FL079102
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|32915187|gb|CF019999.1|CF019999
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211220949|gb|FL461815.1|FL461815
EST:     AAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: AAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|32910381|gb|CF015193.1|CF015193
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGGGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211485589|gb|FL079116.1|FL079116
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|37374244|gb|CF623466.1|CF623466
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211008103|gb|FL135927.1|FL135927
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|211497138|gb|FL079183.1|FL079183
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|60340477|gb|DN207450.1|DN207450
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
EST: gi|16379488|gb|BI992976.1|BI992976
EST:     TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG                         ATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG
genomic: TGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 774

CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGGTACTTACCTGATGGAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 406

CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGGTACTTACCTGATGGAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 508

CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGGTACTTACCTGATGGAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 446

CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatattt ... acaattttagATTGCAATGAAGGAGCTGAGAGCGCGCAAGATACCCTTCACGATCAGACGGTACTTACCTGATGGAAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAGgtaaatatttttttctgtatattttaaattggaactcttcagattaaaattagcctttttttcttcattctaactatctaataaaatttgaatagtcttt

- - - - - - - - - - - GAGCTT