1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAGgtatatatacacggctagctctgcttacctagctaactatatactacatcaattgtaaagattaaagaatatatatcactatatgcatgttgatagatta...
species | Zea mays |
transcript | GRMZM2G083749_T05 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAG ACTGACACTGCCTCCGTCCTAEST: gi|91874519|gb|EB404476.1|EB404476
genomic: TTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAGgtatatatac ... ttttttgcagACTGACACTGCCTCCGTCCTA
EST: TTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAG ACTGACACTGCCTCCGTCCTACAGGAGACTATTGGCTACATTAGATTCCTCEST: gi|148981124|gb|EE027442.2|EE027442
genomic: TTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAGgtatatatac ... ttttttgcagACTGACACTGCCTCCGTCCTACAGGAGACTATTGGCTACATTAGATTCCTC
EST: TTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAG ACTGACACTGCCTCCGTCCTACAGGAGACTATTGGCTACA
genomic: TTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAGgtatatatac ... ttttttgcagACTGACACTGCCTCCGTCCTACAGGAGACTATTGGCTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTGTCCCCATTTGGCAAGgtatatatacacggctagctctgcttacctagctaactatatactacatcaattgtaaagattaaagaatatatatcactatatgcatgttgatagatta
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