Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtagtcatcttttcctgaacaattaagtatctcttgaaggcattgtctctggctgctttgatctcaaaatcccttatcacctacttttgttgcag

Basic information

species Zea mays
transcript GRMZM2G081102_T03
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G081102_T03 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA16G08090.1 (Glycine max), 5'ss of exon 4
CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgta----tgagt-----agtcatcttttcctgaacaattaagta-----------tctcttgaaggcattgtctc--tggctgc-----------tttgatctcaaaatcccttat-cacctacttttgttgcag
 |||||    ||  | ||| | |||||||||||||| |||||||| || || |||||||| ||| ||||| | ||||||||  | || | |||||||||||||    | | |     | | ||  ||   |  |   ||| ||            | | ||   | |||  |  |  |||  |            ||  |  |  | ||   ||||   |||| ||   ||||||
AAAGAATCGTTCTTTGGAGAGTCTGCAGGCCAATGTGCAGAGGCTCAAAACCTACAAGGCTAAGTTGGTTGTGTTCCCAAGAAGGGCACACAAGGTCAAGgtaaagctaaattcttcaattattattaatttgatggttatgtgcaaattttatttattttatggtcatcattcccttggaagtaggaaacaatattgaagtttgagattgtttatgtccctatttgctttgcag

upper sequence: GRMZM2G081102_T03 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA09G34760.3 (Glycine max), 5'ss of exon 5
CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgta--tgagtagtcatcttttcctgaacaatta-agtatctcttgaaggcattgtctctggctgctttga------tctcaaaatcccttatcacc-tacttttgttgcag
|||||||   ||  | ||  | ||||| || ||||| |||||||| || ||||||||||||||  ||||| | |||||||| || || | |||||| ||||||  | ||  ||    || ||       |||   |||    ||        ||     || ||   |||      | |     ||   |  |||  |  |||| ||| ||
CAAGAACCGTTCTTTGGAAAGTCTGCAAGCTAATGTGCAGAGGCTGAAAACATACAAGGCCAAATTGGTTGTGTTCCCAAGACGGGCACACAAGGTTAAGgtaattcagatgttccattatctattttgattgtggtaggcattttcatttctgatgaaggttgaaatgaaagatgtttgtgtgtcatgtgacactgttgttttattgtag

upper sequence: GRMZM2G081102_T03 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA16G17370.2 (Glycine max), 5'ss of exon 3
CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag--tcatcttttcctgaacaattaagtatctcttgaaggcattg--tctctggctgctttgatctcaaaatcccttatcacctacttttgttgcag--------------------------
 |||||    ||  | ||| | |||||||||||||| |||||||| || || |||||||| ||| ||||| | ||||||||  | || | |||||||||||||    ||   || ||  |   | |     | | ||| |    |    |||   | | |||      | | ||   ||    | | ||   |  ||||     |                          
AAAGAATCGTTCTTTGGAGAGTCTGCAGGCCAATGTGCAGAGGCTCAAAACCTACAAGGCTAAGTTGGTTGTGTTCCCAAGAAGGGCACACAAGGTCAAGgtaaagctaaattcttcaatcattaatttgatgattatgtgcaaattttatttattttatggtcatcattaccttgtaagtagtaaacattgaagtttgagattgtttacatccctaattttgctttgcag

upper sequence: GRMZM2G081102_T03 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA09G34760.2 (Glycine max), 5'ss of exon 4
------CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgta--tgagtagtcatcttttcctgaacaatta-agtatctcttgaaggcattgtctctggctgctttga------tctcaaaatcccttatcacc-tacttttgttgcag
      |||||||   ||  | ||  | ||||| || ||||| |||||||| || ||||||||||||||  ||||| | |||||||| || || | |||||| ||||||  | ||  ||    || ||       |||   |||    ||        ||     || ||   |||      | |     ||   |  |||  |  |||| ||| ||
TCGTCGCAAGAACCGTTCTTTGGAAAGTCTGCAAGCTAATGTGCAGAGGCTGAAAACATACAAGGCCAAATTGGTTGTGTTCCCAAGACGGGCACACAAGgttaaggtaattcagatgttccattatctattttgattgtggtaggcattttcatttctgatgaaggttgaaatgaaagatgtttgtgtgtcatgtgacactgttgttttattgtag

upper sequence: GRMZM2G081102_T03 (Zea mays), 5'ss of exon 4
lower sequence: AT3G48960.1 (Arabidopsis thaliana), 5'ss of exon 3
CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgta-tgagtagtcatcttttcctgaacaattaagt--atctcttgaaggcattgtctctggctgctttgatctcaaaatcccttatcacctacttttgttgcag
|||||||   ||  | |||||  | ||  |||| ||||||||||| || || |||||||| ||| |||||||||||||  |  |||| || | |||||||||| |   | |  | |   |  |  |   || |||  |     |||| | | ||  | ||| |    |||||||    |   |   |   |  || ||||  ||
CAAGAACCGGTCTTTGGAGGGTTTTCAAACCAACGTCCAGAGGCTGAAAACCTACAAGGCTAAGTTGGTTATCTTCCCGCGCTGTGCCCGAACGGTCAAGgtactccttcgcaagcaactggtttagggttcagtggactgtatgaatggaatggatttggata---tgatctctttgttgttatgcttttgtttgtgtt-tag

upper sequence: GRMZM2G081102_T03 (Zea mays), 5'ss of exon 4
lower sequence: Vv13s0047g01160.t01 (Vitis vinifera), 5'ss of exon 3
CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtagtcatcttttcctgaacaattaagtatctcttgaaggcattgtctctggctgctttgatctcaaaatccc-ttatcac-ctacttttgttgcag
 ||||||   || || ||| | || || || |||||||||||| | |||||||||||||||||  ||||| |||||||||| |||||||||||  |||||||         ||| |||  ||| || |     | |   || ||  ||    || |   |   |  || | || |||   ||||  | || |||||| |||||
TAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGAGGTTGAAGACATACAAGGCCAAATTGGTTGTCTTCCCAAGACGTGCTCGCAAATTCAAGgt---------cat-tttaactggacgaaatgcttttgattaaa--caaaagctatccatttctgtatgttaacatcatgttattgctctccttttgctgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60355816|gb|DN222789.1|DN222789
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60345778|gb|DN212751.1|DN212751
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|78079926|gb|DV508338.1|DV508338
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60338613|gb|DN205586.1|DN205586
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32849232|gb|CD988913.1|CD988913
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGT
EST: gi|101398368|gb|EB821056.1|EB821056
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|76287867|gb|DV027435.1|DV027435
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|5018343|gb|AI714536.1|AI714536
EST:     AAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: AAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211419059|gb|FL425549.1|FL425549
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGSTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|31909999|gb|CD651202.1|CD651202
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211029288|gb|FL369418.1|FL369418
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71317294|gb|DR795331.1|DR795331
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|5018433|gb|AI714626.1|AI714626
EST:     CATNCAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211112079|gb|FL283004.1|FL283004
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60356360|gb|DN223333.1|DN223333
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32909677|gb|CF014489.1|CF014489
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60352223|gb|DN219196.1|DN219196
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|13150746|gb|BG321068.1|BG321068
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60400975|gb|DN233782.1|DN233782
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211485701|gb|FL425128.1|FL425128
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGSTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211466704|gb|FL410764.1|FL410764
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|76012272|gb|DT939442.1|DT939442
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|13558997|gb|BG550352.1|BG550352
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACT
EST: gi|76287200|gb|DV026768.1|DV026768
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211153124|gb|FL378534.1|FL378534
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|31558555|gb|CD527767.1|CD527767
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|6918394|gb|AW399924.1|AW399924
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|6526841|gb|AW216110.1|AW216110
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32913244|gb|CF018056.1|CF018056
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32864594|gb|CF004276.1|CF004276
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60351013|gb|DN217986.1|DN217986
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71310790|gb|DR791695.1|DR791695
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71441294|gb|DR822344.1|DR822344
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60358400|gb|DN225373.1|DN225373
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|76281373|gb|DV020941.1|DV020941
EST:     TGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: TGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60397725|gb|DN230541.1|DN230541
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71310791|gb|DR791696.1|DR791696
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71441293|gb|DR822343.1|DR822343
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|26557113|gb|CA829348.1|CA829348
EST:     CATACAAGGCCAAACTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCCCTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32913278|gb|CF018090.1|CF018090
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71300904|gb|DR786481.1|DR786481
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|31558008|gb|CD527220.1|CD527220
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211518135|gb|FL378867.1|FL378867
EST:     ATANCAAGGCCA-GCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTAC-ACTGCTACCCAGGTACAGGGT
genomic: ATA-CAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211085123|gb|FL402165.1|FL402165
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGKCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTG
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTG
EST: gi|29946685|gb|CB816274.1|CB816274
EST:     CATACAAGGGCAAGCTGGGTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAG
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAG
EST: gi|60343870|gb|DN210843.1|DN210843
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71307562|gb|DR790002.1|DR790002
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|29129959|gb|CB380663.1|CB380663
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211141936|gb|FL417375.1|FL417375
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTNGAGGAGCTTACCACTGSTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|37391134|gb|CF632808.1|CF632808
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60350798|gb|DN217771.1|DN217771
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|5608453|gb|AI902030.1|AI902030
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|29945649|gb|CB815747.1|CB815747
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|67030644|gb|CO459393.1|CO459393
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32847778|gb|CD987459.1|CD987459
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTAC
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTAC
EST: gi|29544598|gb|CB604978.1|CB604978
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCT
EST: gi|32849157|gb|CD988838.1|CD988838
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCCGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGT
EST: gi|29129925|gb|CB380629.1|CB380629
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|28930879|gb|CB334240.1|CB334240
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32912920|gb|CF017732.1|CF017732
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|30704465|gb|CD058533.1|CD058533
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211112080|gb|FL283005.1|FL283005
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|31909997|gb|CD651201.1|CD651201
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60340081|gb|DN207054.1|DN207054
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|76287199|gb|DV026767.1|DV026767
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTTTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|15313481|gb|BI478726.1|BI478726
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211314895|gb|FL369685.1|FL369685
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|26557549|gb|CA829784.1|CA829784
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCCCTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|31558009|gb|CD527221.1|CD527221
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTAC
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTAC
EST: gi|31558556|gb|CD527768.1|CD527768
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|17921790|gb|BM259441.1|BM259441
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|13150194|gb|BG320516.1|BG320516
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71317288|gb|DR795330.1|DR795330
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|33092992|gb|CF052986.1|CF052986
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTA
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTA
EST: gi|111145782|gb|EE258167.1|EE258167
EST:     CGTACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|71332917|gb|DR803481.1|DR803481
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|30704469|gb|CD058534.1|CD058534
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|5030731|gb|AI714925.1|AI714925
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|28910211|gb|CB331324.1|CB331324
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211112082|gb|FL283007.1|FL283007
EST:     CATACAACGCCAAGCTGGTTATCTTCCCGAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60342153|gb|DN209126.1|DN209126
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|33101506|gb|CF061466.1|CF061466
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGT
EST: gi|28987522|gb|CB351675.1|CB351675
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|60395719|gb|DN228589.1|DN228589
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|15589508|gb|BI674124.1|BI674124
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|211351235|gb|FL411969.1|FL411969
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACC-AGGGTACAGGG
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGG-TACAGGG
EST: gi|60341225|gb|DN208198.1|DN208198
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|20508168|gb|BQ279920.1|BQ279920
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32908172|gb|CF012985.1|CF012985
EST:     CATACAAGGCCCAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCGAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|32855685|gb|CD995366.1|CD995366
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|33097459|gb|CF057419.1|CF057419
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACACAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
EST: gi|78082165|gb|DV510577.1|DV510577
EST:     CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAG                         GCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT
genomic: CATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtag ... tttgttgcagGCTGGTGACTCTACTCTGGAGGAGCTTACCACTGCTACCCAGGTACAGGGT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CAAGAACAAATCCCTTGAGGGGCTGCAGGCCAATGTCCAGAGGCTTAAGACATACAAGGCCAAGCTGGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGgtatgagtagtcatcttttcctgaacaattaagtatctcttgaaggcattgtctctggctgctttgatctcaaaatcccttatcacctacttttgttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG