1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAGgtaccttgcactttgttgagcagattttttagtgcaaaaatggatgtttagtgataatggctaactcacttaagagttttatcaacatcaacatagcctt...
species | Zea mays |
transcript | GRMZM2G074479_T04 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGCAATTTTAACTTCTATCCAG TCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCAEST: gi|9824941|gb|BE575038.1|BE575038
genomic: TGCAATTTTAACTTCTATCCAGgtaccttgca ... gtttttgcagTCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCA
EST: ACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAG TCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCAEST: gi|1298473|gb|W21709.1|W21709
genomic: ACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAGgtaccttgca ... gtttttgcagTCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCA
EST: ACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAG TCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCAEST: gi|5650301|gb|AI920661.1|AI920661
genomic: ACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAGgtaccttgca ... gtttttgcagTCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCA
EST: AGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAG TCCCTGCTGGGTGATCCAAACCCAAACTCCCCTGCAA-CTCAGAAGCAGCAEST: gi|211280163|gb|FL132357.1|FL132357
genomic: AGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAGgtaccttgca ... gtttttgcagTCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCA
EST: ACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAG TCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCA
genomic: ACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAGgtaccttgca ... gtttttgcagTCCCTGCTGTGTGATCCAAACCCAAACTCCCCTGCAAACTCAGAAGCAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACCAGTGGAGTCCTATATATGATGTTGCTGCAATTTTAACTTCTATCCAGgtaccttgcactttgttgagcagattttttagtgcaaaaatggatgtttagtgataatggctaactcacttaagagttttatcaacatcaacatagcctt
- - AGTGGA
- - GTGGAG
- - - - - - - - - - - - - TGCTGC