1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCAGAACTGGATGGTTGAAGCTGGTGAAAAGATCAAGTTTCCAGGTGGTGGAACCCATTTTCACCATGGAGCTGACAAATATATATCAAATATTGCAAATgtaagccttttgtcttgattcttttgtaagttgccctgaaattctttaatctaacccatctctactgtttggcag
species | Zea mays |
transcript | GRMZM2G067764_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AACCCATTTTCACCATGGAGCTGACAAATATATATCAAATATTTGCAA-T ATGCTAATTTTCA-GGATAACAATATAAACAATGATGGGATGEST: gi|93011970|gb|EB637490.1|EB637490
genomic: AACCCATTTTCACCATGGAGCTGACAAATATATATCAAATATT-GCAAATgtaagccttt ... tgtttggcagATGCTAAATTTCAAGGATAACAATATAAACAATGATGGGATG
EST: GAACCCATTTTCACCATGGAGCTGACAAATATATATCAAATATTGCAAAT ATGCTAAATTTCAAGGATAACAATATAAACAATGATGGGATGCTTCGTACA
genomic: GAACCCATTTTCACCATGGAGCTGACAAATATATATCAAATATTGCAAATgtaagccttt ... tgtttggcagATGCTAAATTTCAAGGATAACAATATAAACAATGATGGGATGCTTCGTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGAACTGGATGGTTGAAGCTGGTGAAAAGATCAAGTTTCCAGGTGGTGGAACCCATTTTCACCATGGAGCTGACAAATATATATCAAATATTGCAAATgtaagccttttgtcttgattcttttgtaagttgccctgaaattctttaatctaacccatctctactgtttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA