Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGCAGCCAGTTCTAGATATGGTATTCCTTCTGACTGTTGGTGTTGTAGGTTGCCAAGAATTCGATGGGATGTTGCATGGCTCCCACTCGGTCCTTTGATgtatgatgtgacttgaatctctcttaatcttctttcagcaactactcatgaatagtagtagttaacatacgattgtcctgtatatatgtgctactgtgcag

Basic information

species Zea mays
transcript GRMZM2G064767_T03
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G064767_T03 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os01g37850.1 (Oryza sativa), 5'ss of exon 6
CAGCAGCCAGTTCTAGATATGGTATTCCTTCTGACTGTTGGTGTTGTAGGTTGCCAAGAATTCGATGGGATGTTGCATGGCTCCCACTCGGTCCTTTGATgtatgatgtgacttgaatctctcttaatcttctttcagcaactactcatgaatagtagtagttaacatacgattgtcctgtatatatgtgctactgtgcag
                                                 ||| || ||||||||||||||||| |||||||||||  | || ||||||||||||| | |  ||||  ||  |||  ||||  |||   ||       | ||  | |  | |||||  ||  ||||| |  | ||| | |  |  || ||||
-------------------------------------------------GTTACCGAGAATTCGATGGGATGTAGCATGGCTCCCGTTTGGCCCTTTGATgtatgcttt--cttgcttccttct--atctgtttttcacagaccaagaggatcatttcttgttaa--taacattgttcgttttatctatattgttgggcag