1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAAAGTGCCAGTATCAACAATGTCACCTGGGATCTACTTTTGTACCTGAGCTGCGTGGATACTTCTTGGGAACTGAAAATTTATATTTTACTTCAAAGgtccattacatgtttcttttctccttttgcatgtcaaccttttcttctgactcttctaactcctgtgcattatgtgacag
species | Zea mays |
transcript | GRMZM2G056944_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGCTGCGTGGATACTTCTTGGGAACTGAAAATTTATATTTTACTTCAAAG TTCTTTGGACTTAAGAAGTCTTCATCACTATCTGATTTCATGTTTGCTGGAEST: gi|32827306|gb|CD966984.1|CD966984
genomic: AGCTGCGTGGATACTTCTTGGGAACTGAAAATTTATATTTTACTTCAAAGgtccattaca ... tatgtgacagTTCTTTGGACTTAAGAAGTCTTCATCACTATCTGATTTCATGTTTGCTGGA
EST: AGCTGCGTGGATACTTCTTGGGAACTGAAAATTTATATTTTACTTCAAAG TTCTTTGGACTTAEST: gi|60341251|gb|DN208224.1|DN208224
genomic: AGCTGCGTGGATACTTCTTGGGAACTGAAAATTTATATTTTACTTCAAAGgtccattaca ... tatgtgacagTTCTTTGGACTTA
EST: AAATTTATATTTTACTTCAAAG TTCTTTGGACTTAAGAAGTCTTCATCACTATCTGATTTCATGTTTGCTGGA
genomic: AAATTTATATTTTACTTCAAAGgtccattaca ... tatgtgacagTTCTTTGGACTTAAGAAGTCTTCATCACTATCTGATTTCATGTTTGCTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAAGTGCCAGTATCAACAATGTCACCTGGGATCTACTTTTGTACCTGAGCTGCGTGGATACTTCTTGGGAACTGAAAATTTATATTTTACTTCAAAGgtccattacatgtttcttttctccttttgcatgtcaaccttttcttctgactcttctaactcctgtgcattatgtgacag
- - - - - - - - - - - - - - - - - - - - - - - - AGCTGC