1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
TGAGAAGCGTCGTGAACTTATTGAAGTTGTTTCTGAAGTAGATGACCAGCTTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaactttaccttcttaacaagtgttttctagtctactatatgtctatatcttcattatttatctttttttcattattattgtgtacctatgta...
species | Zea mays |
transcript | GRMZM2G056393_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATGEST: gi|67019503|gb|CO448252.1|CO448252
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
EST: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACGGAGGTTCATACCAGTATACATGEST: gi|19436218|gb|BM952628.1|BM952628
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
EST: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATGEST: gi|19351127|gb|BM895659.1|BM895659
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
EST: ATGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATGEST: gi|32931849|gb|CF036661.1|CF036661
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
EST: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACAGAAGTTCATACCAGTATACATGEST: gi|87154041|gb|DY398830.1|DY398830
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
EST: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATGEST: gi|118406757|gb|EH038205.1|EH038205
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
EST: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAG GCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
genomic: TTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaa ... tctttatcagGCGGCTATTCGAAGAGCTACAGTGGCACGGAAGTTCATACCAGTATACATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGAAGCGTCGTGAACTTATTGAAGTTGTTTCTGAAGTAGATGACCAGCTTGCTGAAGCTTTTCTCAATGATGAGCCAATAACAGCTAATCAGCTTAAGgtttgttaaactttaccttcttaacaagtgttttctagtctactatatgtctatatcttcattatttatctttttttcattattattgtgtacctatgta
- - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT