1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTCTGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatactctcttgccttctattgatgctatgagctcttatcttatataatctataatctgagctagatctttttccacattcctcttttgcag
species | Zea mays |
transcript | GRMZM2G053764_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGCTCTGTATGTTTANATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGGTTTTGAAGNATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|32859414|gb|CD999095.1|CD999095
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTCTGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|50325609|gb|CO520735.1|CO520735
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|5895785|gb|AW037031.1|AW037031
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTCTGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|211174889|gb|FL306344.1|FL306344
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTTTTCCTTCCACAGCTGTTACTATATCCAA
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatactctcttgccttctattgatgctatgagctcttatcttatataatctataatctgagctagatctttttccacattcctcttttgcag
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