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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatatttgtgttttaatgccatgttcttattttcttactttttagcataccgagttgaaattccacctgcaattgttcatgtgttgtgcatatag...

Basic information

species Zea mays
transcript GRMZM2G050925_T01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G050925_T01 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os04g35090.1 (Oryza sativa), 5'ss of exon 4
TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatatttgtgttttaatgccatgttcttattttcttactttttagcata-ccgagttgaaattccacctgcaattgttcatgtgttgtgcatatag
||| ||||| |||| |||||||||||| |||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||||||||| || ||||||| ||  |   |    ||      | |  ||||| |  |  | | |    || |  | ||||  |   ||    |||     |   |        ||  
TGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAGGGTGGAGCTCCTGCTGAGTTCCAGCCATCCTTTAGGgtaatcaactactttccctacaagtgtttcattattgttctgttgtgtcatgtagcttatttgacttgttacgctgaatacaagacaagcaaaatccatt-

upper sequence: GRMZM2G050925_T01 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os02g34460.1 (Oryza sativa), 5'ss of exon 4
TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagca--tatttgtgttttaatgccatgttcttattttcttactttttag-cataccgagttgaaattccacctgcaattgttcatgtgttgtgcatatag
||||||| ||||||  ||||||||||| ||||||||||| || ||||| |||||||| || ||| |||| |||||||| || ||||||||||| |||||||||| ||   | || ||  | | |   |   | | | | | | |     ||  |||    | |||||   | ||  || ||  | |||  | |      | | 
TGGAGACCGGGATGGCTACCGTGGTGGACCTCGTGGTGCGCCTGGTGATTTTGGTGGTGAGAAGGGTGGTGCTCCTGCAGAATTCCAGCCATCATTCAGGgtaatcaatcaattctgcct-attattagtgtttcactatgtgaggagataaacatgatta-ttgaatagcaactcgccatcctacataagctaattggaaa-

upper sequence: GRMZM2G050925_T01 (Zea mays), 5'ss of exon 4
lower sequence: Vv16s0050g01160.t01 (Vitis vinifera), 5'ss of exon 4
TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatatttgtgttttaatgccatgttcttattttcttactttttagcataccgagttgaaattccacctgcaattgttcatgtgttgtgcatatag-
||| ||  | |||| ||| ||||| |||||||||||  |||| || || |||||||| || ||| | |||||||||||||| |||||||| || || |||||||  |||| | | |  |||    |   |   || |    |  | |     |  | |        | || |   | || ||    |    |   | | | 
TGGTGATCGTGATGGGTATCGTGGAGGCCCTCGTGGCCCTCCAGGCGAGTTTGGTGGTGACAAGGGAGGAGCTCCTGCTGACTTCCAGCCTTCATTTAGGgtaataatatctctctcataagattagcattaaatatcggaaggtgtctatttctctatgcagtgcttcatcc-tagtttttagcatcaattaattgttgt

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18171697|gb|BM341537.1|BM341537
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18163083|gb|BM332922.1|BM332922
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|4730762|gb|AI649928.1|AI649928
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|113656350|gb|DW810662.1|DW810662
EST:     GAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGGTGGCAGCGGCTTTGG
genomic: GAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGG-TGGCAGCGGCTTTGG
EST: gi|4835089|gb|AI670315.1|AI670315
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|76020050|gb|DT947220.1|DT947220
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18171715|gb|BM341555.1|BM341555
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|33097341|gb|CF057301.1|CF057301
EST:     TCGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGTGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|22552651|gb|BU102490.1|BU102490
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|86473688|gb|DY240058.1|DY240058
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|211448197|gb|FL410300.1|FL410300
EST:     TGGTGGCGATAAGAGTGGAGCTCCTGCTGAGT-CCANGC-ATCTTTCAGG                         AGTTCTGGCGCAAGGC-TGGCTTTGGCCGTGGTG
genomic: TGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCA-GCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTG
EST: gi|18170762|gb|BM340602.1|BM340602
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|45846784|gb|CN070727.1|CN070727
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGTCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|4827599|gb|AI668291.1|AI668291
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|93016864|gb|EB642384.1|EB642384
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|16922977|gb|BM075969.1|BM075969
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17931964|gb|BM268924.1|BM268924
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18172687|gb|BM348075.1|BM348075
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|32807051|gb|CD959285.1|CD959285
EST:     TCGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGTGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|166535721|gb|EG117522.1|EG117522
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGG
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGG
EST: gi|32807428|gb|CD959662.1|CD959662
EST:     TCGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTG-TGGTGGCAGTGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17930723|gb|BM267683.1|BM267683
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|32824632|gb|CD964354.1|CD964354
EST:     TCGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGTGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|20301451|gb|BQ164394.1|BQ164394
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17929388|gb|BM266348.1|BM266348
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|78082395|gb|DV510807.1|DV510807
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTTTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18165131|gb|BM334970.1|BM334970
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|78074399|gb|DV502833.1|DV502833
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|211021976|gb|FL373954.1|FL373954
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGTCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18170409|gb|BM340249.1|BM340249
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|78082396|gb|DV510808.1|DV510808
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18169018|gb|BM338858.1|BM338858
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|211501497|gb|FL028061.1|FL028061
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18164707|gb|BM334546.1|BM334546
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18175566|gb|BM350835.1|BM350835
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|166460494|gb|EG260676.1|EG260676
EST:     GGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: GGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18169112|gb|BM338952.1|BM338952
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17932219|gb|BM269179.1|BM269179
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18161950|gb|BM331789.1|BM331789
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|22935805|gb|BU572080.1|BU572080
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|21626013|gb|BQ620934.1|BQ620934
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17931578|gb|BM268538.1|BM268538
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|94475893|gb|EB704851.1|EB704851
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|71439852|gb|DR820902.1|DR820902
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|50328582|gb|CO523708.1|CO523708
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|31358616|gb|CD442973.1|CD442973
EST:     TCGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGTGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17931080|gb|BM268040.1|BM268040
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|91056101|gb|EB166519.1|EB166519
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|148995686|gb|EE034906.2|EE034906
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18166778|gb|BM336617.1|BM336617
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18175130|gb|BM350518.1|BM350518
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|78026413|gb|DV494800.1|DV494800
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTTTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|93016865|gb|EB642385.1|EB642385
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|32807844|gb|CD960078.1|CD960078
EST:     TCGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGTGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|120480896|gb|EH211080.1|EH211080
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|113786711|gb|DW903322.1|DW903322
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGC
EST: gi|211321903|gb|FL420982.1|FL420982
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCGAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTT
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTT
EST: gi|18169065|gb|BM338905.1|BM338905
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17929591|gb|BM266551.1|BM266551
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|113669580|gb|DW818414.1|DW818414
EST:     CGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: CGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|22935565|gb|BU571840.1|BU571840
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|67017839|gb|CO446588.1|CO446588
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|60345271|gb|DN212244.1|DN212244
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|211366018|gb|FL393816.1|FL393816
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGC
EST: gi|4572739|gb|AI586388.1|AI586388
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18170757|gb|BM340597.1|BM340597
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|16922610|gb|BM075651.1|BM075651
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18170812|gb|BM340652.1|BM340652
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|18167200|gb|BM337039.1|BM337039
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
EST: gi|17931343|gb|BM268309.1|BM268309
EST:     TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGG                         AGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC
genomic: TTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 263

TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGCGCTGGCCCGACCTCTTCCATGGAGTGAACAGTGAAGCTGCCCTTAGTTT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 186

TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGCGCTGGCCCGACCTCTTCCATGGAGTGAACAGTGAAGCTGCCCTTAGTTT


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 182

TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGCGCTGGCCCGACCTCTTCCATGGAGTGAACAGTGAAGCTGCCCTTAGTTT


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 94

TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatat ... aatattgcagAGTTCTGGCGCAAGGCCTGGCTTTGGCCGTGGTGGTGGCAGCGGCTTTGGCGCTGGCCCGACCTCTTCCATGGAGTGAACAGTGAAGCTGCCCTTAGTTT


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGTGGAGCTCCTGCTGAGTTCCAGCCATCTTTCAGGgtaagcatatttgtgttttaatgccatgttcttattttcttactttttagcataccgagttgaaattccacctgcaattgttcatgtgttgtgcatatag

- - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT