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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATCGGGCTCCAGAGGTTCTACTGCAATCTTCAGTTTATACACCTGCTATTGgtaatttcatggtgcccttgtcctgccttttggtttgatattacccttttagttatttgttatgtatagtctactgtatttctaatacgactacacataa...

Basic information

species Zea mays
transcript GRMZM2G045241_T07
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G045241_T07 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os03g63020.1 (Oryza sativa), 5'ss of exon 8
GTATCGGGCTCCAGAGGTTCTACTGCAATCTTCAGTTTATACACCTGCTATTGgtaatttcatggtgcccttgtcc-tgccttttggt-ttgatattaccctt----ttagttatttgttatgtatagtctactgtatttctaatacg-actacacataa---------------------------------------
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GTATCGAGCTCCAGAGGTGCTGCTACAATCGTCAGCTTACACACCTGCTATTGgtgatgcc-tattatcccagcccctgcattttactacttccatttttattaatgccagctcaacatgaaatttgagtttgtgcatataaaactcgcattgcatgaaactactgaattatataactgatagatgtgcacttcctcag