1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GATGTGGGAGAACCTGGAACAGCTGAGGAGgtttgatcatttaccacattgttctcttgaaaatatttcaatctttaattggtccccttaagtctactgaaatgtaaacatcctgtagttaattgaagca...
species | Zea mays |
transcript | GRMZM2G044553_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GATGTGGGAGAACCTGGAACAGCTGAGGAG GGGCACAATATGGAAGGTGATCCTGAACTTATTGACGATTCTGAGTTTTATEST: gi|166442996|gb|EG233528.1|EG233528
genomic: GATGTGGGAGAACCTGGAACAGCTGAGGAGgtttgatcat ... tgtaacttagGGGCACAATATGGAAGGTGATCCTGAACTTATTGACGATTCTGAGTTTTAT
EST: GATGTGGGAGAACCTGGAACAGCTGAGGAG GGA-ACAATATGGAAGGTGATCCTGAACTTATTGACG
genomic: GATGTGGGAGAACCTGGAACAGCTGAGGAGgtttgatcat ... tgtaacttagGGGCACAATATGGAAGGTGATCCTGAACTTATTGACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGTGGGAGAACCTGGAACAGCTGAGGAGgtttgatcatttaccacattgttctcttgaaaatatttcaatctttaattggtccccttaagtctactgaaatgtaaacatcctgtagttaattgaagca
- - - GGAGAA
- - - - - - - - - CAGCTG
- - - - - - - - - - AGCTGA
- - - - - - - - - - - - GAGGAG