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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACTTGTAAATTTGGTTCCAATTGCAAATATCACCATCCTAAGCAAGATGGATCTGTGCAGTCTGTTATATTAAACAACAATGGATTCCCTCTACGCCTGgtatgagaattctcctatgattgtgtttcttggattttttaagtattattggaaaaaataattgacattaatgaagtgcag

Basic information

species Zea mays
transcript GRMZM2G036837_T02
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G036837_T02 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os01g15460.2 (Oryza sativa), 5'ss of exon 4
AACTTGTAAATTTGGTTCCAATTGCAAATATCACCATCCTAAGCAAGATGGATCTGTGCAGTCTGTTATATTAAACAACAATGGATTCCCTCTACGCCTGgtatgagaattctcctatgattgtgtttcttgga-----ttttttaagtattattggaaaaaataattgacattaatgaagtgcag
 ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||   ||||||| |||||||||| |||||||||| |||||||||| ||| |  |||| ||  ||  || || ||        | ||||   | || |   ||| |    |||  |  ||| || |||||
GACTTGCAAATTTGGTACCAATTGCAAATATCACCATCCTAAGCAAGATGGAGCTGTGCTACCTGTTATGTTAAACAACAGTGGATTCCCTATACGCCTGgtgtgaaatctctcgtaaaatattgcttattcatacacttgtttttcctgttttgaaaaagagatgttggtacaaataaaatgcag