1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CATGTTCCTAAAACTAATGGAGAGATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaattttagagtgtgtgtattagacagagctgatgtgccatagtagtagataagacatttggaaaatgttaccaacaccaaaccggtgtttgt...
species | Zea mays |
transcript | GRMZM2G035150_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAG GTTGGTGGTGTACGGTTTGGTEST: gi|71427954|gb|DR809004.1|DR809004
genomic: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaa ... tttccaaaagGTTGGTGGTGTACGGTTTGGT
EST: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAG GTTGGTGGTGTACGGTTTGGTTGATCTCAAGGGTAAAGGAGATGGCAACTGEST: gi|88748647|gb|DY532788.1|DY532788
genomic: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaa ... tttccaaaagGTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTG
EST: AAGCCATTTCAGATCATCAAAGACTTCTTGACAG GTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTGEST: gi|74235679|gb|DT643593.1|DT643593
genomic: AAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaa ... tttccaaaagGTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTG
EST: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAG GTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGGCA-CTEST: gi|71763432|gb|DR961369.1|DR961369
genomic: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaa ... tttccaaaagGTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGG-CAACT
EST: AAGCCATTTCAGATCATCAAAGACTTCTTGACAG GTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTGEST: gi|76291810|gb|DV031378.1|DV031378
genomic: AAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaa ... tttccaaaagGTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTG
EST: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAG GTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTG
genomic: ATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaa ... tttccaaaagGTTGGTGGTGTACGGTTTGGTTGATCTCAAGGTTAAAGGAGATGGCAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGTTCCTAAAACTAATGGAGAGATTCCTTCTGTTGACGAAGCCATTTCAGATCATCAAAGACTTCTTGACAGgtaaaccaaattttagagtgtgtgtattagacagagctgatgtgccatagtagtagataagacatttggaaaatgttaccaacaccaaaccggtgtttgt
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