1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CTGCCAACTCAGATGTACATGGCACTGgtaaggcataattccaagtttcgctgatatttattttggttcctgcagtgtaatgattgaacttggcttttgcaatgcag
species | Zea mays |
transcript | GRMZM2G024733_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGCCAACTCAGATGTACATGGCACTG CTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGCEST: gi|71432685|gb|DR813735.1|DR813735
genomic: CTGCCAACTCAGATGTACATGGCACTGgtaaggcata ... tgcaatgcagCTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGC
EST: CTGCCAACTCAGATGTACATGGCACTG CTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGCEST: gi|71770193|gb|DR968130.1|DR968130
genomic: CTGCCAACTCAGATGTACATGGCACTGgtaaggcata ... tgcaatgcagCTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGC
EST: CTGCCAACTCAGATGTACATGGCACTG CTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGCEST: gi|94472307|gb|EB701265.1|EB701265
genomic: CTGCCAACTCAGATGTACATGGCACTGgtaaggcata ... tgcaatgcagCTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGC
EST: CTGCCAACTCAGATGTACATGGCACTG CTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGEST: gi|76288325|gb|DV027893.1|DV027893
genomic: CTGCCAACTCAGATGTACATGGCACTGgtaaggcata ... tgcaatgcagCTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAG
EST: CTGCCAACTCAGATGTACATGGCACTG CTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGC
genomic: CTGCCAACTCAGATGTACATGGCACTGgtaaggcata ... tgcaatgcagCTATATACCATCACAACTCTAATTCTTACCGTACAGACGATATACTATAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCCAACTCAGATGTACATGGCACTGgtaaggcataattccaagtttcgctgatatttattttggttcctgcagtgtaatgattgaacttggcttttgcaatgcag
- - - - CAGATG