1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GACCCTTAGGACAAGAGATTACCTTGTTTCCTTTGGTGAATGTATGTCGACAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaatgctatgcttctatataacaacaaatgcttttagttataagcaagttggggtaggtgctatgcttctatacacgcatactactatttaat...
species | Zea mays |
transcript | GRMZM2G024686_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAG TATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCGEST: gi|148945409|gb|EC890633.2|EC890633
genomic: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaa ... ttttgggcagTATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCG
EST: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAG TATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCGEST: gi|71757140|gb|DR955077.1|DR955077
genomic: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaa ... ttttgggcagTATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCG
EST: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAG TATGATGCATTTGATATTGGCTTTAATA-CCACCGATGATTTCACAAATGCEST: gi|91877619|gb|EB407576.1|EB407576
genomic: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaa ... ttttgggcagTATGATGCATTTGATATTGGCTTTA-TAACCACCGATGATTTCACAAATGC
EST: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAG TATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCGEST: gi|148963115|gb|EE014078.2|EE014078
genomic: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaa ... ttttgggcagTATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCG
EST: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAG TATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCGEST: gi|149000754|gb|EE037974.2|EE037974
genomic: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaa ... ttttgggcagTATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCG
EST: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAG TACGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACCAATGCG
genomic: CAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaa ... ttttgggcagTATGATGCATTTGATATTGGCTTTATAACCACCGATGATTTCACAAATGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACCCTTAGGACAAGAGATTACCTTGTTTCCTTTGGTGAATGTATGTCGACAAGAATATTTGCTGCATATTTGAACAAACTTGGGAAAAAAGCACGCCAGgtgagtcaaatgctatgcttctatataacaacaaatgcttttagttataagcaagttggggtaggtgctatgcttctatacacgcatactactatttaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacaacaa