1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTTCCAAGCTGAGGTTTCCAGACTCATGGACATCATCATCAACTCACTCTACAGCAACAAGGATATCTTCCTGAGGGAGCTCATATCTAATGCCTCTGATgtatgtactacatactgacccctgtgtttgttctgcattgtggatgctcgaaattaactgggtgttctacatgtctgtag
species | Zea mays |
transcript | GRMZM2G022909_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACAGCAACAAGGATATCTTCCTGAGGGAGCTCATATCTAATGCCTCTGAT GCTGGATAAGATTAGGTTCCTTTCCCTTACTGATAAGGAAGTTCTGGGTGAEST: gi|10697593|gb|BE997317.1|BE997317
genomic: ACAGCAACAAGGATATCTTCCTGAGGGAGCTCATATCTAATGCCTCTGATgtatgtacta ... atgtctgtagGCTGGATAAGATTAGGTTCCTTTCCCTTACTGATAAGGAAGTTCTGGGTGA
EST: CAGCAACAAGGATATCTTCCTGAGGGAGACACATATCTAATGCCTCTGAT GCTGGATAAGATTAGGTTCCTTTCCCTTACTGATAAGGAAGTTCTGGGTGA
genomic: CAGCAACAAGGATATCTTCCTGAGGGAG-CTCATATCTAATGCCTCTGATgtatgtacta ... atgtctgtagGCTGGATAAGATTAGGTTCCTTTCCCTTACTGATAAGGAAGTTCTGGGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCCAAGCTGAGGTTTCCAGACTCATGGACATCATCATCAACTCACTCTACAGCAACAAGGATATCTTCCTGAGGGAGCTCATATCTAATGCCTCTGATgtatgtactacatactgacccctgtgtttgttctgcattgtggatgctcgaaattaactgggtgttctacatgtctgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA