1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCAgtatgtatatccgatgttgacaacctctgagatgcgtttagtttagtctttaaaagttatttgcgattttggcattttgcttttaaccatcgcgaagctgatatgatataattgtcatttaactggtttgcttgtgtatatgaag
species | Zea mays |
transcript | GRMZM2G018946_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCA GAATGGTATATACCTCAAGGTTCAAGTTACTCTCGTAGGGTTTCAAACTAAEST: gi|78082630|gb|DV511040.1|DV511040
genomic: GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCAgtatgtatat ... gtatatgaagGAATGGTATATACCTCAAGGTTCAAGTTACTCTCGTAGGGTTTCAAACTAA
EST: GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCA GAATGGTATATACCTCAAGGTTCAAGCTACTCTCGTAGGGTTTCAAACTAAEST: gi|78074317|gb|DV502751.1|DV502751
genomic: GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCAgtatgtatat ... gtatatgaagGAATGGTATATACCTCAAGGTTCAAGTTACTCTCGTAGGGTTTCAAACTAA
EST: GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCA GAATGGTATATACCTCAAGGTTCAAGTTACTCTCGTAGGGTTTCAAACTAA
genomic: GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCAgtatgtatat ... gtatatgaagGAATGGTATATACCTCAAGGTTCAAGTTACTCTCGTAGGGTTTCAAACTAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTCGTTCAgtatgtatatccgatgttgacaacctctgagatgcgtttagtttagtctttaaaagttatttgcgattttggcattttgcttttaaccatcgcgaagctgatatgatataattgtcatttaactggtttgcttgtgtatatgaag
- - CTGAAG
- - - TGAAGA
- - - - - - - - - - - AAGGAA