1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTGTGCACTTTCGGTCTCTGGACAAACCAAAGGATGATGATTTTTCTTTGGAATTgtaagggattgcaaatgaaactgataaactggtttacatttgaacttcggttttacgttggaactttggttttgaatcaacatacatatgtgtttcttgttttcacttag
species | Zea mays |
transcript | GRMZM2G014805_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CACTTTCGGTCTCTGGACAGACCAAAGGATGATGATTTTTCTTTGGAATT GTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGCACATAAACTEST: gi|32934023|gb|CF038835.1|CF038835
genomic: CACTTTCGGTCTCTGGACAAACCAAAGGATGATGATTTTTCTTTGGAATTgtaagggatt ... tttcacttagGTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGCACATAAACT
EST: CACTTTCGGTCTCTGGACAAACCAAAGGATGATGATTTTTCTTTGGAATT GTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGCACATAAACTEST: gi|60354119|gb|DN221092.1|DN221092
genomic: CACTTTCGGTCTCTGGACAAACCAAAGGATGATGATTTTTCTTTGGAATTgtaagggatt ... tttcacttagGTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGCACATAAACT
EST: AAGGATGATGATTTTTCTTTGGAATT GTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGCACATAAACT
genomic: AAGGATGATGATTTTTCTTTGGAATTgtaagggatt ... tttcacttagGTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGCACATAAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTGCACTTTCGGTCTCTGGACAAACCAAAGGATGATGATTTTTCTTTGGAATTgtaagggattgcaaatgaaactgataaactggtttacatttgaacttcggttttacgttggaactttggttttgaatcaacatacatatgtgtttcttgttttcacttag
- - - - - - - - - - - - - - - AGGATG