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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTAATATACAATGAAGATGTTGATTCTTGGAGTTGCACGAAATAACCTTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATGgtaagtttattcaccttttatttcatcagacattatgacattccattttgagacaaggatctacaacaattatgtagaagcaatcctttaacaacatatg...

Basic information

species Zea mays
transcript GRMZM2G014367_T01
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32934225|gb|CF039037.1|CF039037
EST:     CTTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATG                         GATGGGAGAGTGTCGGATGCTTCTTCATATACTATTTCTTGGTCCATCAAA
genomic: CTTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATGgtaagtttat ... ttttcaatagGATGGGAGAGTGTCGGATGCTTCTTCATATACTATTTCTTGGTCCATCAAA
EST: gi|12970345|gb|BG266937.1|BG266937
EST:     TTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATG                         GATGGGAGAGTGTCGGATGCTTCTTCATATACTATTTCTTGGTCCATCAAA
genomic: TTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATGgtaagtttat ... ttttcaatagGATGGGAGAGTGTCGGATGCTTCTTCATATACTATTTCTTGGTCCATCAAA
EST: gi|211038615|gb|FL457701.1|FL457701
EST:     CTTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATG                         GATGGGAGAGTGTCGGATGCTTCTTCATAWACTATTTCTTGGTCCATCAAA
genomic: CTTGTGATTGTGATTAGTTACTTCAAAGCGTTTTTTGGTCTTAATGCATGgtaagtttat ... ttttcaatagGATGGGAGAGTGTCGGATGCTTCTTCATATACTATTTCTTGGTCCATCAAA