1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCTCACCATCAGATGCACCAGAACCATCAAAATCGGCGTCTTCTATTCCAGATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataactcctggtataaatttgctagattcttttatgggcgacaagtgttctctataaatttgaagctattttattaatcgcttgcatgtctgct...
species | Zea mays |
transcript | GRMZM2G014066_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|71305273|gb|DR788770.1|DR788770
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|93283598|gb|EB675862.1|EB675862
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: CCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|78074874|gb|DV503308.1|DV503308
genomic: CCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|32809740|gb|CD961974.1|CD961974
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|32827729|gb|CD967407.1|CD967407
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAGGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|211484732|gb|FL156866.1|FL156866
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGCEST: gi|211538730|gb|FL481471.1|FL481471
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
EST: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAG TATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
genomic: GATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataa ... tcgatggcagTATTGATTCATCTCTCACAAGCGAGGAAAGGGAGCAAAAGCGGAAACAGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTCACCATCAGATGCACCAGAACCATCAAAATCGGCGTCTTCTATTCCAGATGGCGCCTCAATACGTAAGGAGACACCGGTTCAGCCTTGGGAGTCGAGgtatatataactcctggtataaatttgctagattcttttatgggcgacaagtgttctctataaatttgaagctattttattaatcgcttgcatgtctgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA