1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGTCAGGCAAAAGATAAgtaagtgcatttgtctcttgttttcttatagtcttatatatcacaaaatttgaactccctggttgtctttttagcttggaaccaggtaccaccttaccca...
species | Zea mays |
transcript | GRMZM2G013607_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCAACTGCAACAAGTGGTGATCTGGATGAAAGTAGTCAGGCAAAAGATAA CATCTCGGTAACATTTGTCAACAGGGATGGCTCAGAAAAGACAATATGTGTEST: gi|60340656|gb|DN207629.1|DN207629
genomic: TCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGTCAGGCAAAAGATAAgtaagtgcat ... ctgtgaacagAATCTCGGTAACATTTGTCAACAAGGATGGCTCAGAAAAGACAATATGTGT
EST: TCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGTCAGGCAAAAGATAA AATCTCGGTAACATTTGTCAACAAGGATGGCTCAGAAAAGACAATATGTGTEST: gi|76018911|gb|DT946081.1|DT946081
genomic: TCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGTCAGGCAAAAGATAAgtaagtgcat ... ctgtgaacagAATCTCGGTAACATTTGTCAACAAGGATGGCTCAGAAAAGACAATATGTGT
EST: AAAGTAGTCAGGCAAAAGATAA AATCTCGGTAACATTTGTCAACAAGGATGGCTCAGAAAAGACAATATGTGT
genomic: AAAGTAGTCAGGCAAAAGATAAgtaagtgcat ... ctgtgaacagAATCTCGGTAACATTTGTCAACAAGGATGGCTCAGAAAAGACAATATGTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGTCAGGCAAAAGATAAgtaagtgcatttgtctcttgttttcttatagtcttatatatcacaaaatttgaactccctggttgtctttttagcttggaaccaggtaccaccttaccca
- - - - - - - - - - - - - - - - - - AGGATG