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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc...

Basic information

species Zea mays
transcript GRMZM2G012052_T01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtgggg-cttgttcaaagctattacta-tttactatttaactcatacaattattcttgcatactgt--ggtgtgtctgtgcgttggttttttctgtgtgaggcc
|||||||||||| || || ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||| || || ||  ||| || | |     ||| | | |  |  |    |  | |  |    |  |  |  |||      |   | |    |  |   ||| || | |    
TTATCCTGATGGGCGCGTATGCATTTCTATCCTTCATCCACCTGGCGAAGATCCCAACGGTTATGAGCTTGCGAGCGAACGGTGGACACCTGTGCATACAgtaggttcttttttacaatgcatacaagtgtttttctctctttgttcgttggcacaggtgttttgtccaacattcttatagactcttcaattcggtataa----

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA12G06960.1 (Glycine max), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc----
 ||||| ||||| || |||||||| || ||||||||||| |||||||| ||||| |||||||| |||||||| || || || |||||||| || || |||||  |   ||  || |   |||||| || | ||||  ||  ||    |   | |||   |||  |      ||  | | |||   |||  |  ||||       
ATATCCCGATGGCCGGGTTTGCATATCAATTCTTCATCCTCCTGGTGAGGATCCAAATGGTTACGAGCTTGCGAGTGAGCGCTGGACACCTGTTCATACGgtatg---tgaacatataaattactcttcattattacacctatggcttggctattggtgactaagaatcaacttagtggtggaaatttgag-atgagattatct

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA13G40990.1 (Glycine max), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc--------
 ||||||||||| || |||||||| || ||||||||||| |||||||| || || |||||||||||||||||||| || || ||||| || || || || ||      |||| |||   |||||    ||  |||||| | ||  | ||||| || ||    |   | || || |   | || | | | ||  | |            
GTATCCTGATGGGCGAGTTTGCATATCAATTCTTCATCCTCCTGGTGACGACCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACGCCTGTTCATACAgta-----tgtttaaa--cattacaccataa-atttaatttatttatttatttttacaatgagacctctgcctttttttagggtctgtttggataaacttttccataa

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA11G14980.1 (Glycine max), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggg-gcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc
 ||||||||||| || |||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||| || || |||||||| || || |||||  | |    |  |||  ||| | |   |  |   ||     |    |   | |||   |||  |      ||  | | |||   |||  |  ||||   
ATATCCTGATGGCCGGGTTTGCATATCAATTCTTCATCCTCCTGGTGAGGATCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACACCTGTTCATACGgtacgtgaacatataaaattataaattactctttactatggtttggcttggctgttggtgactaagaatcaacttagtggtggaaatttgag-atgagttt

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: GLYMA15G04470.1 (Glycine max), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgtt-caaagctattact---atttactatttaactcatacaattat--tcttgcatactgt---ggtgtgtctgtgcgttggttttttctgtgtgaggcc
 || || ||||| || |||||||| || |||||||||||||| ||||| || || |||||||||||||||||||| || || ||||| || || || || ||  |  |      ||| | || | |   ||| | |  || | |   ||||| |      ||| |  |||   ||||||| | || | |    |||||  |        
GTACCCCGATGGGCGAGTTTGCATATCAATTCTTCATCCACCCGGTGATGACCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACGCCTGTTCATACAgtatgtataaacataaaaccataaatttaattaatttatttattttaacaatgagagctctgccttttgttagggtgtgtgtttg-gataaacttttccat--------

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: AT3G55380.2 (Arabidopsis thaliana), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggctt----------gttcaaagctattact------atttact-----atttaactcatacaattattcttgcatactgtggtgtg-tctgtgcgttggttttttctgtgtgaggcc---------------------
|||| ||||||||   ||||||||||||||||||||||| |||||||| |||||  |||| || ||||||||    ||||| ||||| || || || |||||  |  ||          ||| |     | ||||      ||||  |       || | | ||  |    |||    ||  || ||| || | | |    |    || |  |  |   ||                      
TTATTCTGATGGAAAAGTTTGCATTTCTATTCTTCATCCTCCTGGTGATGATCCTCATGGATACGAGCTTGCCTCTGAACGTTGGACCCCTGTCCATACGgtatgttttttcttttaccgtttagcttcagtactctggtaatttgtttgcagggttgagttatctatggcttcgaatatcttggggtctgctttatagcctaacattcttcgaatacagctagctttctcttgtgtagatag

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: AT3G46460.1 (Arabidopsis thaliana), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc-----------------
|||||| ||||| || ||||| || |||||||| ||||| |||||||| ||||| | ||| |||||||||||||| || || ||||| || || ||||| ||  |  ||      | | |  | | |       | |  ||  | ||   |  |   |||     |  ||  |||   || | |||   || |||                      
TTATCCCGATGGCCGCGTTTGTATATCTATTCTACATCCTCCTGGTGATGATCCAAGTGGATATGAGCTTGCAAGTGAGCGTTGGACGCCTGTTCACACAgtacgttttacaatgatccaacattctccttgtatgatatctgagaagcttcttcttataaccaagaatga-tgtcaattagatttga-tgagtggaaataacattgctgatttcag

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: AT3G55380.1 (Arabidopsis thaliana), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactattta-actcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc-------
|||| ||||||||   ||||||||||||||||||||||| |||||||| |||||  |||| || ||||||||    ||||| ||||| || || || |||||  |  || |      || ||||  ||||   |    ||||    |||| |  |||||   | ||   | ||| ||  || |  | |  || |    ||        
TTATTCTGATGGAAAAGTTTGCATTTCTATTCTTCATCCTCCTGGTGATGATCCTCATGGATACGAGCTTGCCTCTGAACGTTGGACCCCTGTCCATACGgtatgtttttt------cttttaccgtttagcttcagtactctggtaatt-tgtttgcagggt-tgagttatctatggcttcgaatatcttggggtctgctttatagc

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: AT5G59300.1 (Arabidopsis thaliana), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtg---------------gggcttgttcaaagctatt-actatttactatttaactca-----tacaattattcttgc----atactgtggtgtg-tctgtgcgttggttttttc-tgtgtgaggcc------------------------------------
|||| ||||||| ||||||||||| |||||||||||||| || ||||| ||||| |  |||||||||||||||||||| || ||||| || || || || ||                | | |||||||    | ||  ||   || || |  | ||      || | ||| | | |     | ||| |   | | ||| |  ||   || |||| ||| | ||                                       
TTATTCTGATGGTCGTGTTTGCATATCTATTCTTCATCCTCCCGGTGATGATCCTAGCGGTTATGAGCTTGCAAGCGAGCGTTGGACTCCTGTTCATACAgtatgttcaaattgatttgagtttgttcatttttgttcgcttcatagtagtagattctatgattagagttactatagttcagacactataaagggatctctaggtgatttatttcatgtctcagatgttcatgccgtagtgaaacaaattatggtgctttcag

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: Vv06s0004g04430.t01 (Vitis vinifera), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgtt-caaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc
|||||| |||||||| || ||||| || ||||| ||||| |||||||| || || ||||| |||||||||||||| || || ||||  ||| | || |||||    | | |  || | | | | |  || |||  ||  ||   |  ||            |  |  |||   ||   |      |     |||  |  | 
TTATCCAGATGGACGAGTATGCATATCAATTCTCCATCCTCCTGGTGAGGACCCAAATGGATATGAGCTTGCAAGTGAGCGCTGGATGCCAATCCATACGgtaattcatatagcatatcaaattcacttcacttctttgctttcatgatagagacgttgcccattaatgtaattgaatgcaaacatggaa-gtgccacact

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: Vv08s0007g00120.t01 (Vitis vinifera), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactat--ttactatttaactca-tacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc
||||||||||||||| |||||||| || ||| | ||||| |||||||| || || ||||| |||||||||||||| || || |||||||| || ||||||||        |   ||  |  | | ||   || |  ||    |  |   |  |||  |    ||||   || |   ||   |   | | || |   ||   | 
TTATCCTGATGGACGAGTTTGCATATCAATTTTACATCCTCCTGGTGAGGACCCAAATGGCTATGAGCTTGCAAGTGAGCGTTGGACACCTGTCCACACGgtacatacaatctgaacttccttcaatgactatttcttgctcctctgtgagcatttatattcactgccttggg---gtcgatcaatctgttgtacatgcttct

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: PP1S75_236V6.1 (Physcomitrella patens), 5'ss of exon 6
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattact-at------------ttactatttaactcatacaattattcttgcatactgtgg---tgtgtctgtgcgttggttttttctgtgtgaggcc---------------------------
||||||||||||||| ||||||||||| ||||| ||| | |||||||| ||||| |||||||||||  | || || || || ||| | || ||||| || ||| |  || |  ||   | ||| | ||            || ||||  || ||||    |  ||| |||  ||||| |         ||     |  || |   |||  | | ||                           
TTATCCTGATGGACGGGTTTGCATTTCAATTCTACATGCTCCTGGTGATGATCCAAATGGTTATGAATTGGCGAGTGAGCGTTGGTCTCCCGTGCATACTgtgag--ttatcaaagtgttttatttatcgagtaaaggtgttgctatgcaattcatgtg-tgtttcatgcccactgtagatgcaaacttggtatctaattctaattgttagtgtccgactgatagttgtttgtgaaagtgcag

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: EFJ37995 (Selaginella moellendorffii), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggg---gcttg-ttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc
 ||||| || || ||||||||||| || || |||||  | ||||| || ||||||||||| || ||||| || |||||||||||| | || || ||||||||  |   ||||| | |  |||| | |  | ||  || |   |   |    || |                                                 
CTATCCGGACGGCCGTGTTTGCATCTCCATCCTTCACGCTCCTGGAGACGATCCCAATGGCTACGAGCTGGCGAGCGAACGATGGTCTCCGGTTCACACGgtatgcgtgcttgatcccgagctctcaa-acttcttactcgtcgtgtgtgcttctcag----------------------------------------------

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 4
lower sequence: EFJ31863 (Selaginella moellendorffii), 5'ss of exon 4
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc
 ||||| || || ||||||||||| || || |||||  | ||||| || ||||||||||| || ||||| || |||||||||||| | || || ||||||||  | | || |  |  ||    || |  |   | | |||| | |   | | |||                                             
CTATCCGGACGGCCGTGTTTGCATCTCCATCCTTCACGCTCCTGGAGACGATCCCAATGGCTACGAGCTGGCGAGCGAACGATGGTCTCCGGTTCACACGgtatg-cgtgcttgat-ctcgagctctcaaacttcttactcgt-cgtgtgtgcttctcag----------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8368602|gb|BE051547.1|BE051547
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GGTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|78106424|gb|DV524842.1|DV524842
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTTTGAGCATCATTTCGATGCTCTTTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60397439|gb|DN230255.1|DN230255
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32866577|gb|CF006259.1|CF006259
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|8367792|gb|BE050737.1|BE050737
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32866578|gb|CF006260.1|CF006260
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202269|gb|FL182834.1|FL182834
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         -TTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|78106425|gb|DV524843.1|DV524843
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211204840|gb|FL182847.1|FL182847
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199710|gb|FL182823.1|FL182823
EST:     AATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: AATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60349853|gb|DN216826.1|DN216826
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|15590017|gb|BI674633.1|BI674633
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32859566|gb|CD999247.1|CD999247
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32912414|gb|CF017226.1|CF017226
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32937161|gb|CF041980.1|CF041980
EST:     ATCCCGATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|67032154|gb|CO460903.1|CO460903
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199713|gb|FL182826.1|FL182826
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32915780|gb|CF020592.1|CF020592
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202277|gb|FL182842.1|FL182842
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         TTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32937054|gb|CF041873.1|CF041873
EST:     ATCCCAATGGTTATGAGCTCGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211124251|gb|FL435188.1|FL435188
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTYTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202270|gb|FL182835.1|FL182835
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         NTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGGTCCAAATGA
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAG-TCCAAATGA
EST: gi|211202278|gb|FL182843.1|FL182843
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GGTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|87157616|gb|DY402405.1|DY402405
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|4646408|gb|AI491587.2|AI491587
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199712|gb|FL182825.1|FL182825
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAG
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAG
EST: gi|211204842|gb|FL182849.1|FL182849
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGA
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAG-TATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGA
EST: gi|40335355|gb|CK369425.1|CK369425
EST:     CCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: CCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|113702787|gb|EE680291.1|EE680291
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063555|gb|FL182811.1|FL182811
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|8665719|gb|BE186535.1|BE186535
EST:     TGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: TGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|67043112|gb|CO469367.1|CO469367
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|8368603|gb|BE051548.1|BE051548
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTT
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTT
EST: gi|6102130|gb|AW126600.1|AW126600
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202267|gb|FL182832.1|FL182832
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202275|gb|FL182840.1|FL182840
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         NTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202273|gb|FL182838.1|FL182838
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         TTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTA
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTA
EST: gi|32865547|gb|CF005229.1|CF005229
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199714|gb|FL182827.1|FL182827
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGT
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGT
EST: gi|32865546|gb|CF005228.1|CF005228
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32934222|gb|CF039034.1|CF039034
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|16927032|gb|BM080101.1|BM080101
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|213182646|gb|FM192378.1|FM192378
EST:     GATGGACACCAGTGCACACG                         GTTGAAAGTATAGTNNNGACCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: GATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|37397234|gb|CF635912.1|CF635912
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202268|gb|FL182833.1|FL182833
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|21843234|gb|BQ703815.1|BQ703815
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|50323827|gb|CO518953.1|CO518953
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32910355|gb|CF015167.1|CF015167
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|78081300|gb|DV509712.1|DV509712
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063556|gb|FL182812.1|FL182812
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTTCGATGCTCTCTAGTCCAAATGA
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTT-CGATGCTCTCTAGTCCAAATGA
EST: gi|16926454|gb|BM079522.1|BM079522
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|22818858|gb|BU498948.1|BU498948
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|78081299|gb|DV509711.1|DV509711
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202279|gb|FL182844.1|FL182844
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|26559697|gb|CA831932.1|CA831932
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|78022177|gb|DV490564.1|DV490564
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|9732279|gb|BE511031.1|BE511031
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGTC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60345359|gb|DN212332.1|DN212332
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|13126118|gb|BG316688.1|BG316688
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|28568878|gb|CB280753.1|CB280753
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063552|gb|FL182808.1|FL182808
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202280|gb|FL182845.1|FL182845
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32935615|gb|CF040427.1|CF040427
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|13126542|gb|BG317112.1|BG317112
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|15082608|gb|BI389292.1|BI389292
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063553|gb|FL182809.1|FL182809
EST:     TCCCNATGGTTATGAGCTTTGCA-GCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: TCCCAATGGTTATGAGCTT-GCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32854784|gb|CD994465.1|CD994465
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199711|gb|FL182824.1|FL182824
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         -TTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32855663|gb|CD995344.1|CD995344
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60397474|gb|DN230290.1|DN230290
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|5325242|gb|AI783433.1|AI783433
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|37382707|gb|CF628315.1|CF628315
EST:     CCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: CCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|15057056|gb|BI361028.1|BI361028
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063548|gb|FL182804.1|FL182804
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         -TTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|26557802|gb|CA830037.1|CA830037
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32936878|gb|CF041697.1|CF041697
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60396215|gb|DN229084.1|DN229084
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063558|gb|FL182814.1|FL182814
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|71764281|gb|DR962218.1|DR962218
EST:     ATCCCCATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60395236|gb|DN228105.1|DN228105
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063550|gb|FL182806.1|FL182806
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         -TTGAWAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|5860471|gb|AW011693.1|AW011693
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063559|gb|FL182815.1|FL182815
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|31360886|gb|CD445243.1|CD445243
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|4646409|gb|AI621736.1|AI621736
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199705|gb|FL182818.1|FL182818
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGA
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAA-GTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGA
EST: gi|60340966|gb|DN207939.1|DN207939
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|76289728|gb|DV029296.1|DV029296
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32868626|gb|CF008308.1|CF008308
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32936126|gb|CF040938.1|CF040938
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAACATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32936903|gb|CF041722.1|CF041722
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211202274|gb|FL182839.1|FL182839
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211204841|gb|FL182848.1|FL182848
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         TTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211063547|gb|FL182803.1|FL182803
EST:     TCCCAATGGTTATGAGCTTGCAAGCGAACGATGGTACACCAGTGCACACG                         GTTTGAAAGTATAGTTCTGGAGCATCATTTGCGATGCTCTCTAGTCCAAAT
genomic: TCCCAATGGTTATGAGCTTGCAAGCGAACGATGG-ACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTT-GAAAGTATAGTTCTG-AGCATCATTT-CGATGCTCTCTAGTCCAAAT
EST: gi|21891417|gb|BQ744630.1|BQ744630
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60399525|gb|DN232336.1|DN232336
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|32915813|gb|CF020625.1|CF020625
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60336778|gb|DN203751.1|DN203751
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|60341208|gb|DN208181.1|DN208181
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|211199708|gb|FL182821.1|FL182821
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|76917380|gb|DV166802.1|DV166802
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
EST: gi|9732280|gb|BE511032.1|BE511032
EST:     ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACG                         GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC
genomic: ATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 263

TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 428

TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 473

TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 376

TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttg ... gtaaatgcagGTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTATCCTGATGGACGTGTTTGCATTTCTATTCTTCATCCACCTGGTGAAGATCCCAATGGTTATGAGCTTGCAAGCGAACGATGGACACCAGTGCACACGgtggggcttgttcaaagctattactatttactatttaactcatacaattattcttgcatactgtggtgtgtctgtgcgttggttttttctgtgtgaggcc

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA