1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGTTTTGTGCCGGCGGCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttgagctctgttttttatcggcatttgagattgaagcaggtgcttagtttttttttgtgtctttggtgatattttacgtatataataaaacct...
species | Zea mays |
transcript | GRMZM2G001713_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACA GCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGCEST: gi|31361595|gb|CD445952.1|CD445952
genomic: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttg ... ttcaatgcagGCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGC
EST: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACA GCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGCEST: gi|211222666|gb|FL222431.1|FL222431
genomic: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttg ... ttcaatgcagGCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGC
EST: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACA GCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGCEST: gi|32807856|gb|CD960090.1|CD960090
genomic: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttg ... ttcaatgcagGCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGC
EST: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACA GCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGCEST: gi|211224720|gb|FL222438.1|FL222438
genomic: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttg ... ttcaatgcagGCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGC
EST: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACA GCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGC
genomic: GCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttg ... ttcaatgcagGCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTTTGTGCCGGCGGCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCATAgtaagttttgagctctgttttttatcggcatttgagattgaagcaggtgcttagtttttttttgtgtctttggtgatattttacgtatataataaaacct
- - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aataaaac