1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTTGTCACTCTCTCTCTATTGCCTCACTTCATTGCCTTCTTCAGTGATGCCGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcattactgttattatatatataaaatgcgctgtatgattcttcaggtattaactaaattgttccttcttgcag
species | Zea mays |
transcript | GRMZM2G001265_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATAEST: gi|67022715|gb|CO451464.1|CO451464
genomic: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
EST: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATAEST: gi|60340511|gb|DN207484.1|DN207484
genomic: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
EST: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATAEST: gi|67012486|gb|CO441235.1|CO441235
genomic: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
EST: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATAEST: gi|60338053|gb|DN205026.1|DN205026
genomic: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
EST: TTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATAEST: gi|76919123|gb|DV167601.1|DV167601
genomic: TTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
EST: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATAEST: gi|71298289|gb|DR785121.1|DR785121
genomic: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
EST: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTG TGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
genomic: CGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcat ... cttcttgcagTGTTGAATCTGGCCTTTTCTTTGAGCGTTCTTGGTTTTATGATTATGCATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGTCACTCTCTCTCTATTGCCTCACTTCATTGCCTTCTTCAGTGATGCCGAGATCCCAGGAAGTCCTGCAGCACTTGCAACCACATTTCTCACCTTTGgtaattgcattactgttattatatatataaaatgcgctgtatgattcttcaggtattaactaaattgttccttcttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG