1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTGATGCGGCCATAGTTCGAATAATGAAGACGCGGAAGGTCCTGAGCCACACCCTTCTAATAACCGAGCTTTACCAGCAGgtgacacttcagaatattaattaatttagctgtgtatgttatttaccttacgacaacttgaccccctttaacctttggggttcatccatgtctctcatttcag
species | Zea mays |
transcript | AC177936.6_FGT008 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CGCGGAAGGTCCTGAGCCACACCCTTCTAATAACCGAGCTTTACCAGCAG CTTAAGTTCCCTGTTAAGCCAGCTGATATCAAGAAAAGAATAKAGAGCTTAEST: gi|32939384|gb|CF044203.1|CF044203
genomic: CGCGGAAGGTCCTGAGCCACACCCTTCTAATAACCGAGCTTTACCAGCAGgtgacacttc ... ctcatttcagCTTAAGTTCCCTGTTAAGCCAGCTGATATCAAGAAAAGAATAGAGAGCTTA
EST: CGCGGAAGGTCCTGAGCCACACCCTTCTAATAACCGAGCTTTACCAGCAG CTTAAGTTCCCTGTTAAGCCAGCTGATATCAAGAAAAGAATAGAGAGCTTA
genomic: CGCGGAAGGTCCTGAGCCACACCCTTCTAATAACCGAGCTTTACCAGCAGgtgacacttc ... ctcatttcagCTTAAGTTCCCTGTTAAGCCAGCTGATATCAAGAAAAGAATAGAGAGCTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGATGCGGCCATAGTTCGAATAATGAAGACGCGGAAGGTCCTGAGCCACACCCTTCTAATAACCGAGCTTTACCAGCAGgtgacacttcagaatattaattaatttagctgtgtatgttatttaccttacgacaacttgaccccctttaacctttggggttcatccatgtctctcatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT