1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGAGGTTGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctgggcctatgttatttgtatttacacttattggaaaaatgtatatatgtgttcgccttggacacctaagctataacatttagtatgtgttatgt...
species | Zea mays |
transcript | GRMZM5G836588_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGCEST: gi|76286118|gb|DV025686.1|DV025686
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGCEST: gi|93016568|gb|EB642088.1|EB642088
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
EST: CCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGCEST: gi|211381540|gb|FL250727.1|FL250727
genomic: CCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTNCA-GTATCACACAGEST: gi|211378900|gb|FL250717.1|FL250717
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGT-CAAGTATCACACAG
EST: TGCCGAACTGGGATGGCCAAGATGACCCATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCEST: gi|91051901|gb|EB162319.1|EB162319
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCC
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGCEST: gi|211381541|gb|FL250728.1|FL250728
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCA-G GNAAGGTCATNCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGEST: gi|148931777|gb|EC875053.2|EC875053
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagG-AAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAG
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGCEST: gi|94478487|gb|EB707445.1|EB707445
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
EST: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAG GAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
genomic: TGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctggg ... gattatgcagGAAGGTCATCCATACCGTGGGCCCCAAATATGCTGTCAAGTATCACACAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGTTGCCGAACTGGGATGGCCAAGATGACCAATGCCTACGATCTGCCTGCAAGgtaagctgggcctatgttatttgtatttacacttattggaaaaatgtatatatgtgttcgccttggacacctaagctataacatttagtatgtgttatgt
- - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaatg