1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAGGTGCACGAAGAAAAACTTTGGCCGTTACCACGTGAGCGAGCCACCAGTTGAGCATTTGCGCGATCCACTGTACAAGACAGAGAGGGAGATCATGAAGgtatgctgggatcttcttttttcctgatctcttgactcccccccctattttgcttctccctgctaaatgtcaagatggaatctgctttgcaagttactat...
species | Zea mays |
transcript | GRMZM5G829928_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGAGCATTTGCGCGATCCACTGTACAAGACAGAGAGGGAGATCATGAAG GTTTTCTTGACCAAGCACTACAGAAACAGGCGCGCTGATGACCCAGANNNNEST: gi|211129880|gb|FL468245.1|FL468245
genomic: TTGAGCATTTGCGCGATCCACTGTACAAGACAGAGAGGGAGATCATGAAGgtatgctggg ... cgcaccgcagGTTTTCTTGACCAAGCACTACAGAAACAGGCGCGCTGATGACCCAGATTTT
EST: GACAGAGAGGGAGATCATGAAG GTTTTCTTGACCAAGCACTACAGAAACAGGGCGCGCTGA-GAACCCAGANN
genomic: GACAGAGAGGGAGATCATGAAGgtatgctggg ... cgcaccgcagGTTTTCTTGACCAAGCACTACAGAAACA-GGCGCGCTGATG-ACCCAGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGTGCACGAAGAAAAACTTTGGCCGTTACCACGTGAGCGAGCCACCAGTTGAGCATTTGCGCGATCCACTGTACAAGACAGAGAGGGAGATCATGAAGgtatgctgggatcttcttttttcctgatctcttgactcccccccctattttgcttctccctgctaaatgtcaagatggaatctgctttgcaagttactat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccccccc