1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCGgtgcgtcacatacttctgtaaatttacttgttgagttccaatatatccctgcaaatttgtttgctcgaatcgcccatattatttaatatagactaggtga...
species | Zea mays |
transcript | GRMZM2G469747_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCG CGGTTCACTGTGCCGAATGGGGAATCAGGCCACATATACTGCTGAGAGGCGEST: gi|149079824|gb|EE168824.2|EE168824
genomic: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCGgtgcgtcaca ... catgtatcagCGGTTCACTGTGCCGAATGGGGAATCAGGCCACATATACTGCTGAGAGGCG
EST: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCG CGGTTCACTGTGCCGAATGGGGAATCAGGCCACATATACTGCTGAGAGGCGEST: gi|37425614|gb|CF650553.1|CF650553
genomic: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCGgtgcgtcaca ... catgtatcagCGGTTCACTGTGCCGAATGGGGAATCAGGCCACATATACTGCTGAGAGGCG
EST: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCG CGGTTCACTGTGCCGAATGGGGAATCAGGCCACATATACTGCTGAGAGGCGEST: gi|89250618|gb|DY622404.1|DY622404
genomic: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCGgtgcgtcaca ... catgtatcagCGGTTCACTGTGCCGAATGGGGAATCAGGCCACATATACTGCTGAGAGGCG
EST: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCG CGGTTCACTCGTGCCGAATGGGGAATCAGGCCACATATACCTGCTGAGAGG
genomic: GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCGgtgcgtcaca ... catgtatcagCGGTTCACT-GTGCCGAATGGGGAATCAGGCCACATATAC-TGCTGAGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTACATGTGGGGGTTGCCAGAGCGCCCATGCCGCAGCTATCGgtgcgtcacatacttctgtaaatttacttgttgagttccaatatatccctgcaaatttgtttgctcgaatcgcccatattatttaatatagactaggtga
- - - - - - - - - - - - - - - - GCAGCT