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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTACTCCCAGAACCTGGGTCTGCTGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAGgtaggaactagtcgaccggcggcgattcgttcgcagtgacatgacatcagtttctgactggaaaatgcgcgtccatatgaccatatcag

Basic information

species Zea mays
transcript GRMZM2G454928_T01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71330358|gb|DR801933.1|DR801933
EST:     TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAG                         GGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGG
genomic: TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAGgtaggaacta ... accatatcagGGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGG
EST: gi|78022296|gb|DV490683.1|DV490683
EST:     TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAG                         GGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
genomic: TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAGgtaggaacta ... accatatcagGGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
EST: gi|71323819|gb|DR798581.1|DR798581
EST:     TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAG                         GGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
genomic: TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAGgtaggaacta ... accatatcagGGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
EST: gi|78109734|gb|DV528150.1|DV528150
EST:     TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAG                         GGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
genomic: TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAGgtaggaacta ... accatatcagGGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
EST: gi|78109735|gb|DV528151.1|DV528151
EST:     TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAG                         GGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC
genomic: TGGTGCCCTTCTTCGACAGCCCTTCGCTCGAGCTAGAGAACATTGAGAAGgtaggaacta ... accatatcagGGTTCGAGGGCCGAAACGAAGTTCGTCAAGGCGACATGGAAACTAAGGTTC