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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTACCTGCTTTAAATTCACTATCAACTGTTTTCCAGCTTGTCCTTTGGGTGCTTATTGTCCACTTGGGACATTGAACGACACTACTGGACTTTGTGATCCgtaagatgaattttcatttccagcactttatttgccattaaatattcttgattattactgctcagcgcttgtctagttgacttttctttttttatgaaactataccag

Basic information

species Zea mays
transcript GRMZM2G430675_T03
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18661984|gb|BM501682.1|BM501682
EST:     GCTTATTGTCCACTTGGGACATTGAACGACACTACTGGACTTTGTGATCC                         GTATTTTTACCAAATTACTCCAGGAAAGAGCACTGCATGTGGTGCAGCAGA
genomic: GCTTATTGTCCACTTGGGACATTGAACGACACTACTGGACTTTGTGATCCgtaagatgaa ... actataccagGTATTTTTACCAAATTACTCCAGGAAAGAGCACTGCATGTGGTGCAGCAGA
EST: gi|87153810|gb|DY398599.1|DY398599
EST:     GCTTATTGTCCACTTGGGACATTGAACGACATTACTGGACTTTGTGATCC                         GTATTTTTACCAAATTACTCCAGGAAAGAGCACTGCATGTGGTGCAGCAGA
genomic: GCTTATTGTCCACTTGGGACATTGAACGACACTACTGGACTTTGTGATCCgtaagatgaa ... actataccagGTATTTTTACCAAATTACTCCAGGAAAGAGCACTGCATGTGGTGCAGCAGA
EST: gi|18654968|gb|BM499773.1|BM499773
EST:     GCTTATTGTCCACTTGGGACATTGAACGACACTACTGGACTTTGTGATCC                         GTATTTTTACCAAATTACTCCAGGAAAGAGCACTGCATGTGGTGCAGCAGA
genomic: GCTTATTGTCCACTTGGGACATTGAACGACACTACTGGACTTTGTGATCCgtaagatgaa ... actataccagGTATTTTTACCAAATTACTCCAGGAAAGAGCACTGCATGTGGTGCAGCAGA