1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAACTACGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAGgtttgttcctggtctcccgaacgttatggcactaaaattcttgccatttgtgtactcatgttttctaagctaattctcgcataagctgaagctaggcatg...
species | Zea mays |
transcript | GRMZM2G428964_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTGEST: gi|50330549|gb|CO525675.1|CO525675
genomic: CGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
EST: CTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTGEST: gi|78121376|gb|DV539760.1|DV539760
genomic: CTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
EST: CTACGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTGEST: gi|76289755|gb|DV029323.1|DV029323
genomic: CTACGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
EST: CCCATTTCCAACTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTGEST: gi|71445933|gb|DR826983.1|DR826983
genomic: CCCATTTCCAACTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
EST: CTACGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTGEST: gi|71324440|gb|DR798920.1|DR798920
genomic: CTACGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
EST: CAACTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTGEST: gi|89246796|gb|DY618583.1|DY618583
genomic: CAACTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
EST: AGCCCATTTCCAACTGATGGAAAGCAG GGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
genomic: AGCCCATTTCCAACTGATGGAAAGCAGgtttgttcct ... tggcatacagGGATGGTGGAGCACTGGTTTCTCATATGGCTTGTGGATTGCTTCTCTAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACTACGGCATACATTGAGAAGTCTAGCCCATTTCCAACTGATGGAAAGCAGgtttgttcctggtctcccgaacgttatggcactaaaattcttgccatttgtgtactcatgttttctaagctaattctcgcataagctgaagctaggcatg
- - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - GATGGA