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GGAGAAAAAAGAGACTGAATATATGCGCTTGCAGAGACACAAGATGGGAGTTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctcttttcagtttccattctttaacagtttgtgcaaaccagtccaatgatatacatgacattatttctgtttcttttgaattctatctatccca...
species | Zea mays |
transcript | GRMZM2G375904_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAG GTGCGTCTTTGTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAGEST: gi|149070121|gb|EE158521.2|EE158521
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTCTT-GTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAG
EST: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAG GTGCGTCTTTGTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAGEST: gi|71765287|gb|DR963224.1|DR963224
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTCTT-GTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAG
EST: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAG GTGCGTCTTTGTAGAGAGAAGATCTCTAAGAATGTTTAEST: gi|211061362|gb|FL219436.1|FL219436
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTCTT-GTAGAGAGAAGGTCTCTAAGAATGTTTA
EST: TTGAAGATTTTGANCTTTTGACTATTATTGGGAGAGGTGCMTTCGGAGAG GTGCGTCTTTGTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAGEST: gi|213183785|gb|FM191845.1|FM191845
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTCTT-GTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAG
EST: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAG GTGCGTCTTTGTAGAGAGAAGEST: gi|211073468|gb|FL145045.1|FL145045
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTCTT-GTAGAGAGAAG
EST: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAG GTGCGTCTTTGTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAGEST: gi|67018726|gb|CO447475.1|CO447475
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTCTT-GTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAG
EST: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAG GTGCGTCTTTGTAGAGAGAAGGCCTCTAAGAATGTTTATGCAATGAAAAAG
genomic: TTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctct ... aactgtgcagGTGCGTC-TTGTAGAGAGAAGGTCTCTAAGAATGTTTATGCAATGAAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGAAAAAAGAGACTGAATATATGCGCTTGCAGAGACACAAGATGGGAGTTGAAGATTTTGAACTTTTGACTATTATTGGGAGAGGTGCATTCGGAGAGgtacagctcttttcagtttccattctttaacagtttgtgcaaaccagtccaatgatatacatgacattatttctgtttcttttgaattctatctatccca
- - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG