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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCTCGCATGAGTGCCTTCTCTTACCCTACGAGCAGGCTCTTACCCGTGAGGATTCCACCAGTGGCCTTTTCTATGATTGTTCGACCCACATGTTGTGGgttggtgagcgcactcacaactcgatggagctcatgttgaattcctccgtggtgttgccaaccctctgggcataaaggtcagctttaaatcctttttttctatttgttaagtgcaatctaggcaccatacttgtcctgtgatcctgactgtcaaatttacatgcaatttgtggaatttag

Basic information

species Zea mays
transcript GRMZM2G359822_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G359822_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os07g42960.2 (Oryza sativa), 5'ss of exon 2
GACCTCGCATGAGTGCCTTCTCTTACCCTACGAGCAGGCTCTTACCCGTGAGGATTCCACCAGTGGCCTTTTCTATGATTGTTCGACCCACATGTTGTGGgttggtgagcgcactcac-aactcgatggagctcatgttgaattcctccgtggtgttgccaaccctctgggcataaaggtcagctttaaatcctttttttctatttgttaagtgcaatctaggcaccatac---ttgtcctgtg-atcctgac-tgtcaaatttacatgcaatttgtggaatttag
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------------------------------------------------------------------------------CTGCTCAGCCCACATGCTATGGGTTGGTGAGCGCACTCGCCAGCTCGATGGAGCTCATGTTGAATTTCTCCGTGGTGTTGCCAACCCTCTTGGCATAAAGgtcagcattgagtttattttcataaa--gttatgtgaaatcctaatgttgtttgcagtgccttgtggatgttgacatttcaaactgacattgaccctgtgtaatgtag